Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam11g1925 ATGGAGGAGGATCTCCATTTCTCCGAATACGACTTAATAGGGCAGATTGATTGGAACGACTTCTTTGATGAATTCCCGGAGGTGGAGCTCCCTCTTGTCGGGGATTCAACATCGCCCCACGGATCTCCTGATTCCTTTTCTTCCTGGATCAACCACCTGGAAAACGCTTTATTGAATGACGATCAAGACAAGGGGGTTTCCCTTCCCCCTCCTACCGATGATTGCTGCGATAGTTTTTTGGCTGACGTCCTCGTCGACTCTCATGGAGGAGCCTCTGTAATCGACCTCGATTCCAATGCTTCCGATTGCGGTAACCACTTTAGCAGTTCCCAGAAGGAGGATGGACATAAGGTTTCTCCCGCGCCTACTGACGATTCCTGTGGTAGTTTTATGGCTGAAGTACTTGTAGATACTCACGGGAGCTCCTCCGGGGTTGATGCTGTAGTTGACGTTCTGTCCAACGCTTCCGATTGCGGTGACGACTCGAACAATTCCCAGAAGGAGAAGATCGACGCAACAAACATCGACGATAGTGTAGGTGAAGATGTCGATGATTCGCTTTCTAAAAAGCGGAGAAGGCAGCTGAGAAATAGGGATGCCGCAGTAAGATCTAGGGAGAGGAAAAAGATGTACGTAAAGGATCTAGAGATGAAGAGTAAATTTCTTGAAGGTGAATGCCGGAGATTGGGGCGTTTGCTCCAGTGCTACTGTGCTGAGAATCAAGCCTTACGGTTTAGTCTACAGATGGGAGGCGCTTCTGGTGCTTCACTGACCAAGCAGGAGTCTGCTGTGCTCTTGTTGGAATCCCTGCTGTTGGGTTCCCTGCTTTGGTTAGTGGGCACCGTTTGCCTGTTCACCCTTCCTCAACTCCCACAATCAACTCTGGAACCTGTTCCAAGAGTAACAATGGAGGACGAAGGTCCAGGAAGCGCGCCTCTCAACGAGAATGAAAATAAGTACTCCAGATACTCATACTCATCGTTACAAACTAGGAGGTGCAAAGCGGCGAGAACAAGGATGAAACCAAGATTTAGAAGTGATAGTGTGGCTTTGAGGGTTAATCTGGATGGAGTCGATGGATATATTGGATGGCAAGCAAAGGGTGAGCCTGAAGCCTATAAAAGCTTTATTCCCAAGCAAAACCCTCAAACCTCAGCCCTTACAAGCTACAACCTTCCCTCCTCGCTCACTCTTCACTCTTCTCCTTCATCCTGCATCCTGCATCCTGCATCCGCCATGGACTCCGATTACGGCATTCCCCGTCAACTCTCCGATCTTCAGAAAATCCGCTCTCTCTACCAACCCGACCTCCCTCCTTGTCTCCAGGGAACAGCGGTCAGGGTTGAATTTGGAGATGGCACTACAGCTGTGGATCCTGCTGATGCCCCCACCATTAGTCGGGCCTTTCCCCACACTTACGGTCAACCATTGGCTCACTTTCTCAGGGCAACTGCTAAAGTCCCCGATGCTCAAATTATTACTGTACATCCAGCCATCCGGGTGGGAATAGTTTTTTGTGGAAGGCAATCCCCTGGAGGCCATAACGTCATATGGGGGCTTCATAATGCTCTCAAAGTCCACAACCCAAATAGTATATTGTTTGGATTTCTTGGTGGCTCTGAAGGTTTGTTTTCCCAGAAAACTCTTGAGGTTACCGATGACATTCTTTCAACGTACAAAAATCAAGGTGGTTATGATTTATTGGGACGGACCAAGGATCAAATTCGAACTAAAGAGCAGGTTAATGCTGCACTTAAGACATGCTTAGATTTGAAACTGGATGGTCTTGTCATAATTGGCGGAGTGACGTCAAACACTGATGCTGCTCAACTTGCCGAAACCTTTGCTGAAGCTAAATGCCCCACGAAGGTTGTAGGAGTTCCTGTTACTTTGAATGGCGATCTCAAGAATCAGTTTGTTGAAACAAATGTTGGTTTTGACACTATATGCAAGGTCAATTCTCAGCTAATCAGCAATGTATGCACTGATGCCCTATCTGCAGAGAAGTATTACTATTTCATTCGACTCATGGGCCGGAAAGCATCCCATGTTGCTTTGGAGTGCACTCTTCAATCTCATCCAAATTTGGTTATTCTTGGTGAGGAGGTGGCTGCATCAAAGCTTACTCTTTTTGATTTGACGACACAGATATGTGATGCTGTTCAGGCTAGAGCACAACAAGACAAATACCATGGGGTCATCTTACTGCCCGAAGGGCTCATTGAAAGTATTCCTGAAATCTATGCCCTTTTGAAGGAAATTCACAGTCTACTCAAGCAAGGAGTTCTGGTTGATAATATTTCTTCCCAACTCTCTCCTTGGGCATCAGCGCTATTTGAATTTCTGCCACCTTTCATCAGGAAGCAGTTGCTACTTCATCCTGAATCCGATGACTCTGCTCAGTTATCTCAGATTGAGACGGAGAAACTTTTGGCACATCTTGTGGAGGCTGAAATTAACAAGCGTCTGAAAGAAGGGACTTACAAGGGGAAGAAATTCAATGCAATTTGCCACTTCTTTGGTTACCAGGCTCGGGGATCTTTACCTTCAAAATTTGATTGCGACTATGCCTACGTTCTTGGGCATGTTTGCTACCATATCTTAGCTGCTGGCTTGAACGGTTACATGGCTACTTTAACTAACCTGAAAAATCCTGTGAACAAATGGCGCTGTGGTGCTGCCCCGATTGCAGCCATGATGACTGTGAAGCGTTGGGCTCAAAATCCTGGGGCGTTGTCCATTGGGAAACCTGCAATTCACCCAGCAACTGTGGATTTGAAAGGGAAAGCATACGAGTTATTGAGACAAAATGCGAGTCAGTTTCTTATGGACGATCTGTATAGAAACCCTGGACCTCTTCAGTTTGACGGTCCTGGTGCTGATGCTAAGCCCGTCTCCCTGTGCGTTGAGGACCAGGATTACATGGGCCGCATCAAGAAGCTACAGGAATATCTTGACAAGGTCCGAACAATAGTAAAACCAGGGTGTTCGCAGGAGGTTCTTAAAGCAGCATTAAGCGTCATGGCATCCGTGACTGATGTTCTCTCGGTTATGTCTTCGAGTTCATTCAGCGGAAAAGCATCATTAGAAGGATAA 3096 46.83 MEEDLHFSEYDLIGQIDWNDFFDEFPEVELPLVGDSTSPHGSPDSFSSWINHLENALLNDDQDKGVSLPPPTDDCCDSFLADVLVDSHGGASVIDLDSNASDCGNHFSSSQKEDGHKVSPAPTDDSCGSFMAEVLVDTHGSSSGVDAVVDVLSNASDCGDDSNNSQKEKIDATNIDDSVGEDVDDSLSKKRRRQLRNRDAAVRSRERKKMYVKDLEMKSKFLEGECRRLGRLLQCYCAENQALRFSLQMGGASGASLTKQESAVLLLESLLLGSLLWLVGTVCLFTLPQLPQSTLEPVPRVTMEDEGPGSAPLNENENKYSRYSYSSLQTRRCKAARTRMKPRFRSDSVALRVNLDGVDGYIGWQAKGEPEAYKSFIPKQNPQTSALTSYNLPSSLTLHSSPSSCILHPASAMDSDYGIPRQLSDLQKIRSLYQPDLPPCLQGTAVRVEFGDGTTAVDPADAPTISRAFPHTYGQPLAHFLRATAKVPDAQIITVHPAIRVGIVFCGRQSPGGHNVIWGLHNALKVHNPNSILFGFLGGSEGLFSQKTLEVTDDILSTYKNQGGYDLLGRTKDQIRTKEQVNAALKTCLDLKLDGLVIIGGVTSNTDAAQLAETFAEAKCPTKVVGVPVTLNGDLKNQFVETNVGFDTICKVNSQLISNVCTDALSAEKYYYFIRLMGRKASHVALECTLQSHPNLVILGEEVAASKLTLFDLTTQICDAVQARAQQDKYHGVILLPEGLIESIPEIYALLKEIHSLLKQGVLVDNISSQLSPWASALFEFLPPFIRKQLLLHPESDDSAQLSQIETEKLLAHLVEAEINKRLKEGTYKGKKFNAICHFFGYQARGSLPSKFDCDYAYVLGHVCYHILAAGLNGYMATLTNLKNPVNKWRCGAAPIAAMMTVKRWAQNPGALSIGKPAIHPATVDLKGKAYELLRQNASQFLMDDLYRNPGPLQFDGPGADAKPVSLCVEDQDYMGRIKKLQEYLDKVRTIVKPGCSQEVLKAALSVMASVTDVLSVMSSSSFSGKASLEG 1031
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 31646008 31655743 - CaPI482276_11g019250.1 Cam11g1925 140847

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cam11g1925 1031 Gene3D Phosphofructokinase; domain 3 744 808 - -
Cam11g1925 1031 CDD bZIP_HY5-like 190 241 - -
Cam11g1925 1031 MobiDBLite consensus disorder prediction 156 202 - -
Cam11g1925 1031 MobiDBLite consensus disorder prediction 162 192 - -
Cam11g1925 1031 Pfam Basic region leucine zipper 187 229 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam11g1925 1031 MobiDBLite consensus disorder prediction 105 124 - -
Cam11g1925 1031 NCBIfam diphosphate--fructose-6-phosphate 1-phosphotransferase 426 970 IPR011183 GO:0005524(InterPro)|GO:0006096(InterPro)|GO:0047334(InterPro)
Cam11g1925 1031 Pfam Phosphofructokinase 500 866 IPR000023 GO:0003872(InterPro)|GO:0006096(InterPro)
Cam11g1925 1031 Gene3D - 188 244 - -
Cam11g1925 1031 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 244 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam11g1925 1031 FunFam Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha 744 808 - -
Cam11g1925 1031 SMART brlzneu 184 249 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam11g1925 1031 SUPERFAMILY Leucine zipper domain 189 245 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam11g1925 1031 PANTHER PYROPHOSPHATE--FRUCTOSE 6-PHOSPHATE 1-PHOSPHOTRANSFERASE 422 1021 - GO:0005829(PANTHER)|GO:0008443(PANTHER)|GO:0009749(PANTHER)|GO:0015979(PANTHER)|GO:0047334(PANTHER)
Cam11g1925 1031 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 192 207 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cam11g1925 1031 Gene3D Phosphofructokinase domain 646 959 IPR035966 GO:0003872(InterPro)|GO:0006096(InterPro)
Cam11g1925 1031 Hamap Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 422 973 IPR011183 GO:0005524(InterPro)|GO:0006096(InterPro)|GO:0047334(InterPro)
Cam11g1925 1031 Gene3D - 430 924 - -
Cam11g1925 1031 SUPERFAMILY Phosphofructokinase 424 969 IPR035966 GO:0003872(InterPro)|GO:0006096(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam11g1925 K00895 - - csv:101208728 1171.76
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2221 Cam-Chr1:34686860 Cam11g1925 Cam-Chr11:31646008 2.40E-108 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g32 Blo01g01654 Blo12g00839 . . Bpe02g00289 . Bma04g00305 Bma01g02425 . . . Cma09g00015 . . . . . . . . . . . . . . . . . . . . . . . Lsi04g02428 Csa04g02744 . . . . . . . . . . . . Cmo09g00014 . . . Car09g00014 . . . . . . . . . Cla11g01858 Cam11g1925 Cec11g1952 Cco11g1964 Clacu11g2090 Cmu11g1893 Cre11g2301 . . Chy07g00432 Cme07g00018
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
52959 PF00365 PFK 4.00E-29 CL0240 Cam TF