Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam11g1928 | ATGCGTTTTCGCATAGTGATCACTCCATTATCAGGGATGGCAATGGCGCTAGTTCAGCCACACACTTCAGCTTCTGCAATTTCGTCTTCCTCCGCCTCATTCTACAGAAGTTCTTTTCAGCAACTCCGTTCGCGGACCAGGACCCTTGATCTTCGAAACAGCCACTCCATCCCTCATCGTTCCACTTGCAGAGCTTCCTGGCAGGAGCTTGCAGGGATTCTGATATTCTCTGCAATTCCTTTCACGGCGGTGAAAGCCATCGCCAATAGTCCACTTGGAGAGTCGCTCCAGAGACAATTGGAAAAGAAGAAAAAAGCTGCCGTAGCCAACTCTTCGAAGTTCAAGGCTCTTGCTGAGGAGGCTAGAAAAGATAGCTCATGGTATGGAGAAGGGCGTCCTCGGTGGCTTGGTCCACTACCATATGATTATCCAAAATATCTGACAGGTGAACTGCCTGGTGATTATGGATTTGATATTGCACGTTTGAGTGAGGATCCTGTGGCTTTTCAGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCATCCCTTGGCGCTTTAGTTCCAGAAATCTTAGATATTTTTGGAGCTTTTCATTTTACTGAACCCATCTGGTGGCGAGTGGGCTATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATACCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATTGTCATTGCAATTTGCCAAGCTATTTTGATGGTTGGACCCGAATATGCAAGATATTGTGGCATTGAGGCATTGGAGCCTCTGGGAATATATCTGCCGGGGGATATAAATTATCCAGGTGGTGTGTTGTTTGACCCCTTGAATCTGTCCAAGGATGCTGCAGCCTTTGAGGAACTAAAAGTAAAAGAGATTAAAAATGGGCGTTTAGCCATGGTTGCCTGGCTAGGATTTTACAGTCAAGCTGCTTTGACGGGTCCTCTTGCAATTGGGAATTGCATTTCAATTTGGCAGTTCGAGAATGATTTGTTGGGTTGCAATGGAGCCAAGTGTAGGTCTACTGTCTCCCCTCTCTTCTCTCCCCATTCTCTGAATCAGTTCTCAAGATCTGCATCTGCGAATCTCCCACATTCATGTCTCCTACTCGATGATCTTCTCTACTCGATCTGCCAAATTCAACTCACTCCTCCACTTCTGCTTCAGGTAACTCTCTCTCCTTCAGCAATCTCCCTCTGTGATTGCCTTTGGGAGTGTTTGCTTCTTTCATCCGAAATGATGGCTGACATGGATGTGCTCGCTGACACATCTGAGGTTAACGAGAAGTGTGCCTTGGATATGAGTACCTACGAGAATTTGCCTAAAGGTTGCAATGCAGCATCTCTTCACTGTGCTACTCCCATTCCTAAGGATGATACCGACGGTTCTTACGTTTTCGTTATCTCCACCGATGCTGCTACTTCCGATGATCACGTTGCTTCGGATCTTAATGGGCAAGCAGAGTGTTCTCAGAATGTTGATACGGAGATTATGGTTCGTAATCGGGAATTGAATACTGACGTCGGTAGGAAACCTGAATCAATTATCGTTTCCGATGCGTTGGAGGATTCCCAATTCGAATTTTCTGAGCATGTGAAAGAGAATGACGCAATTCAGGATGAGATCAGAGTGGCGGATGTCCTTCAATCTTCCGACGCCAAGGTGGATGAAGCGGAACCTGGACTGGATTCTTCTCAGACGGTGGAAGAAACTCGAATCCTAGAGGACCAGACTATCAACGTATCTTTTGATGCAGAGACAAATTCTGGCGAAATCCATGGGGTACAGTCTCCTCAAGCAGTTGAAGACAATCAGATTCAGGAGGAAAATCAAAGAATTTCTACCTCTGGATCTTCTAACACCGATGCAAATCGTTGTGGAGAAATCGAGGTGGAGTCTTCCCAAATGGCGGAAGATATTAACAGTCATGAGGATAACGGCATTGTGAAAATCATGAAGTCTTTTGATACCGAAACAAATCATGTGATAAACATCGAGCCGGAGTCTTCTCCGAAGGCAGACGGCATCCAGATTCACAAAGAAAATGGAACGGTTGCAATCAAGTTTTCTGATTTTGAGTCAAACCCTGGGGAAGAAATTGAGGTGGAGTCTTCTCAGAAGGCAGACGACATTCAGAATCACGAGGAAAATGGCATAATGAAATCCTCTTCTGATACCGAGGCAAACCCTAGGTCAGAAATTGAGGTAGAGTCTTCACGGGAGGTTGAAGACATTGAGATTCAGGAGCAAGATGAAGTAGTGGATGCCACCAAATCTTCTGCTACAGTGGAAAAGCGTGGGCAAGAAGGTGAAGTAATCCCCGAGTATAATGACACAGTGGCTATCAATGAATTGTCTGATACCATACATAACAGCAGTAAAGAAACTGAGATGGAATCTTTCGAGAGAGAGGAAGGCATTCGAGAGTCAGAAGATGCAAATTTGGAGGCTGCTGACTGCCATTATGTTAATGGCAAAGAGAAGGTTGATGAGATGGTAAATAAAGCTGTGATAAGCGACCCTGTGGGAGGAATAGGAGAATCTCAAATTATAAGTATGGGTGCTGCTGAATCTGACCTAGATGATTCTGATGATACCATGGAAGACGTTAAGAGGGAATGTACATCAGGGGTTGCCTTGAATGAGGAGAACTCTAAGAAAACTCAATTAACAATTAGTCAGGATGGTGAACATTACCAGGTTGTTGGCGAGGAACAAGAAAATTTAAACAATGAAGTTTCTCTTTTAGAGCCATCAGAAGAAAACAAAGCGGACGTGGAGCAGCATTTGGCAGCAGCTCCTAGTCCACTGGTCAGTTCAGAAGACATAAATGGTTCTATCTCCATTAGCACGGAAGATGGCTTGCCAACTAGTATGGATCAAGATGTCCCCTTGGGAACTATTGATGACAATGACACTGTAGCTAACAGGACCAACTTCCATGACCACACTGAATCCTCATCTGGCTCTGTAGATTGTGATGACGCTACTGTTGAAACTCATCAATTATCTCCTGAGATGCTTATTAGTGATCCAATAGAGTTAAATGAGATTTCTGTGAATGATGAACAAGAGGTGAATCATGTGTTGGAACTAGAAGAGAATTCAGAAATGGCATCTCATCCTAAAATAGATGAATGTGTCAAGGTTGAAGTTTTGGAAGGTACGGTCTCTGGAAATGGAGATGAGGTGCCCACTGCATTCGACGAATCTAGAATTTCTTGTGGTGATGACTTTGTTGCTGGCAGTCAATTAATCGCCGGGGGCACTGAACCAGTGGAAAGCACTGACACAGTATCTGCTGTTGTGATAGGAAATACTTCAATTGAAATAAGGGAACTGGGCTCTACGAATTGTCCTAATGATCCAGTAGTGAGATCCGATCTTGATGTTGAGGATTGTAAAGTGTCTGAAATTGTGGCTTCTGTGGGTGATGTTGTCCGAGCGGATAAAGAAGTCAGGGCAAATCATGAGGTTGATTTTCTTGGTAACTCTAATTTTGAAACCAAGTGTGAGAATGGTCGCATCAAAAAAGATCACCAAGGAACTTTCCATAGTAATGATTTTACGTCAATTGAATATCAAGAAAGAGGTTCCACTGTTCCTGAAATTCCTAATGGTGTCAATAAATCTTCTGCAATTCAACTAAGTTCTGCTGTTGCAACAGACTCGGAATTGCATGATAATGGAAGTTGCTCAATTCCTATTGCTAATAAGAAATCAGGAGACGACATCAAGATTCCATCCTCCAAAGGAGGTGGTAGCAGAAATATATCTGGCGATGATGTCAGTGTGTCAAAAACTGATGTTGTTCTCAAGGGTTCTATAGTAAACGATGAAGGGAATCTGAACTCAACATCTGATGTTGTCTCTGAAACTGATGATAAGCTGGCAACAGAAGAAACTCAGGTCATTCATGAGGGTTGCCAGAATGAACCTTCACCTATTTCTCCAGAAGGTTCTGGTGACACTATAACGGGGCAAAATGTAGGGGCTGAGGCAGGAACAAGGCCGTTTAACTTTTTGGTTAAGGTACCTAGATTCGATGACAAAAATATAAGAGAGCAGATTAAGTGTGCTCAGACAGAAGTTGATTGGAAGACAAAGGATCGAGATGCCATTCGGGTTCAAATACAGACAATGAGGGCTGCATGGAAAGTGTTGAGTGATAATCTTGAAGCAGCAGTGTCGGAAGGAAGAGCTGCAAGAGACTTGCTCAAGTCAAAAAGACTGGAGATAGACTCTGTTCAATCAGTGATAACAAAAGTGAAGAATGCCATGTCTGTTGAGGATATTGATGGCAGGATACGCAACATTGAACATATGATAGAGCATGAAACACTGCCATTAAAAGAAGAAAAACAATTAATTCGTGAAATCAAGCAATTGAAGCAGCTGCGGGAACAGCTTTCATCAACTATGGGTAAGCAGGATGAGCTTCAACAGGCATTGGACCAGAAAGACCAGATTGAAGAGCGCCTTAAGCTATTAAGAAAGGAGATGGATTTACTGAGAGACAATGTTGTGAAAGCTGAATCAGTTATAAAGGCTGCCAAGAAGAAATATAATGATGAAAGCATTAAGCTGGATGAATTGCAATCCCAGTTTAAAGCAGCAGATAAGATTCGCCAAGAAGCATATGCTAATTTACAGAGTATGAGGAAGCAATTATATGAGAAGAACAAATACTGCTGGAAGTATCGGGATGACGCAAAGGAAGCCAATGAAATAGCGTCAAGTCGAGATCTAGAGAGACTGCAACATTTTTGTGTTAATCAGGTGGAGCGCATGATGGAACTGTGGAACACAAATGCTGAGTTCAGGGAAGAATATATTAAGAGCAACATGAGGAGTACCCTGAGGCGACTAAAGACATTGGATGGCCGCTCCCTTGGCCCTAATGAAGAGCCGCATGTACTGAATCTTGTTGTTAAGGAGGGACCAGCGAGGGACAATTCTCTTTCAACGGTTTCAACAACGCAGGAATCTGAAAAACTGATACCCGCTGATGATGCGAGAGATAATGACAAACCAGGGACCAAAGTAGCTGAAACGAAGAATCAAATGACAAAAAGGAAGAAGCCTGAAACAGTTCTGGCTTTAGTGAATGACCCTAGGAATATCTCTAGCGAGAACGAGGTAGAAGAGCCACCACGACCGGAGGAGATTAAGCGAACAAGAGAGGAAGAGGAGCTGGCGGCAAAAGCACAAGAGTTGAGAAAGGAAGAGGAAGCAAGGAAGTTGAAGGAGCAACGGAAGTTGGAAGAGAAGGCCAAAGCCAAAGAGGCGTTGGAGAGGAAAAAAAGAAATGCTGAGAAAGCCCAGGCCAGGGCAGTAATCAAAGCACGAAAAGAGGCAGAAGAGAGGGAGAAGCTAAGGGAGAAGAGAGCAAAAAAGAAGGAAAGGAAGATGGCAGCTGAGACGGAAGCTGGAAATGGTTGGGATGAAAGGGAAGCTGCTTTAGTCACCGAAAAGCCTTCAGAAGCTCCGAAGGAGGAGTCTGAAAACACAGGTAAACAGGGGATGGCACTGGCAGCGAAGAGGCCTCTAAAAGCGTCGCAGTACACAAAGCAGAGCAAGACAAAGTCAATTCCTCCGCCACTTCGAAATCGTGGTAAGAGGAGGATGCAACCATGGATGTGGGTTCTTCTGACAACCGTGGTTGTTTTTGCGCTGTTCTTCGTTGGACAACAACGGCTGCTCTACTAG | 5736 | 44.02 | MRFRIVITPLSGMAMALVQPHTSASAISSSSASFYRSSFQQLRSRTRTLDLRNSHSIPHRSTCRASWQELAGILIFSAIPFTAVKAIANSPLGESLQRQLEKKKKAAVANSSKFKALAEEARKDSSWYGEGRPRWLGPLPYDYPKYLTGELPGDYGFDIARLSEDPVAFQKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMVGPEYARYCGIEALEPLGIYLPGDINYPGGVLFDPLNLSKDAAAFEELKVKEIKNGRLAMVAWLGFYSQAALTGPLAIGNCISIWQFENDLLGCNGAKCRSTVSPLFSPHSLNQFSRSASANLPHSCLLLDDLLYSICQIQLTPPLLLQVTLSPSAISLCDCLWECLLLSSEMMADMDVLADTSEVNEKCALDMSTYENLPKGCNAASLHCATPIPKDDTDGSYVFVISTDAATSDDHVASDLNGQAECSQNVDTEIMVRNRELNTDVGRKPESIIVSDALEDSQFEFSEHVKENDAIQDEIRVADVLQSSDAKVDEAEPGLDSSQTVEETRILEDQTINVSFDAETNSGEIHGVQSPQAVEDNQIQEENQRISTSGSSNTDANRCGEIEVESSQMAEDINSHEDNGIVKIMKSFDTETNHVINIEPESSPKADGIQIHKENGTVAIKFSDFESNPGEEIEVESSQKADDIQNHEENGIMKSSSDTEANPRSEIEVESSREVEDIEIQEQDEVVDATKSSATVEKRGQEGEVIPEYNDTVAINELSDTIHNSSKETEMESFEREEGIRESEDANLEAADCHYVNGKEKVDEMVNKAVISDPVGGIGESQIISMGAAESDLDDSDDTMEDVKRECTSGVALNEENSKKTQLTISQDGEHYQVVGEEQENLNNEVSLLEPSEENKADVEQHLAAAPSPLVSSEDINGSISISTEDGLPTSMDQDVPLGTIDDNDTVANRTNFHDHTESSSGSVDCDDATVETHQLSPEMLISDPIELNEISVNDEQEVNHVLELEENSEMASHPKIDECVKVEVLEGTVSGNGDEVPTAFDESRISCGDDFVAGSQLIAGGTEPVESTDTVSAVVIGNTSIEIRELGSTNCPNDPVVRSDLDVEDCKVSEIVASVGDVVRADKEVRANHEVDFLGNSNFETKCENGRIKKDHQGTFHSNDFTSIEYQERGSTVPEIPNGVNKSSAIQLSSAVATDSELHDNGSCSIPIANKKSGDDIKIPSSKGGGSRNISGDDVSVSKTDVVLKGSIVNDEGNLNSTSDVVSETDDKLATEETQVIHEGCQNEPSPISPEGSGDTITGQNVGAEAGTRPFNFLVKVPRFDDKNIREQIKCAQTEVDWKTKDRDAIRVQIQTMRAAWKVLSDNLEAAVSEGRAARDLLKSKRLEIDSVQSVITKVKNAMSVEDIDGRIRNIEHMIEHETLPLKEEKQLIREIKQLKQLREQLSSTMGKQDELQQALDQKDQIEERLKLLRKEMDLLRDNVVKAESVIKAAKKKYNDESIKLDELQSQFKAADKIRQEAYANLQSMRKQLYEKNKYCWKYRDDAKEANEIASSRDLERLQHFCVNQVERMMELWNTNAEFREEYIKSNMRSTLRRLKTLDGRSLGPNEEPHVLNLVVKEGPARDNSLSTVSTTQESEKLIPADDARDNDKPGTKVAETKNQMTKRKKPETVLALVNDPRNISSENEVEEPPRPEEIKRTREEEELAAKAQELRKEEEARKLKEQRKLEEKAKAKEALERKKRNAEKAQARAVIKARKEAEEREKLREKRAKKKERKMAAETEAGNGWDEREAALVTEKPSEAPKEESENTGKQGMALAAKRPLKASQYTKQSKTKSIPPPLRNRGKRRMQPWMWVLLTTVVVFALFFVGQQRLLY | 1911 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 31668378 | 31688542 | + | CaPI482276_11g019280.1 | Cam11g1928 | 140850 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam11g1928 | 1911 | PANTHER | RNA-BINDING PROTEIN YLMH-RELATED | 1235 | 1903 | - | - | |
Cam11g1928 | 1911 | Coils | Coil | 1462 | 1544 | - | - | |
Cam11g1928 | 1911 | MobiDBLite | consensus disorder prediction | 1234 | 1270 | - | - | |
Cam11g1928 | 1911 | MobiDBLite | consensus disorder prediction | 1660 | 1674 | - | - | |
Cam11g1928 | 1911 | MobiDBLite | consensus disorder prediction | 1318 | 1337 | - | - | |
Cam11g1928 | 1911 | MobiDBLite | consensus disorder prediction | 1675 | 1708 | - | - | |
Cam11g1928 | 1911 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 134 | 343 | - | - | |
Cam11g1928 | 1911 | MobiDBLite | consensus disorder prediction | 1718 | 1844 | - | - | |
Cam11g1928 | 1911 | Coils | Coil | 1734 | 1818 | - | - | |
Cam11g1928 | 1911 | Gene3D | Chlorophyll a/b binding protein domain | 134 | 336 | - | - | |
Cam11g1928 | 1911 | SUPERFAMILY | Chlorophyll a-b binding protein | 126 | 328 | - | - | |
Cam11g1928 | 1911 | Coils | Coil | 862 | 882 | - | - | |
Cam11g1928 | 1911 | MobiDBLite | consensus disorder prediction | 1658 | 1881 | - | - | |
Cam11g1928 | 1911 | MobiDBLite | consensus disorder prediction | 737 | 751 | - | - | |
Cam11g1928 | 1911 | Pfam | Chlorophyll A-B binding protein | 144 | 319 | IPR022796 | - | |
Cam11g1928 | 1911 | MobiDBLite | consensus disorder prediction | 726 | 751 | - | - | |
Cam11g1928 | 1911 | MobiDBLite | consensus disorder prediction | 603 | 633 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam10g1500 | Cam-Chr10:28771723 | Cam11g1928 | Cam-Chr11:31668378 | 3.90E-40 | dispersed | |
Cam11g1395 | Cam-Chr11:26609014 | Cam11g1928 | Cam-Chr11:31668378 | 1.60E-22 | dispersed | |
Cam11g1827 | Cam-Chr11:30801769 | Cam11g1928 | Cam-Chr11:31668378 | 3.10E-25 | dispersed | |
Cam11g1928 | Cam-Chr11:31668378 | Cam02g1907 | Cam-Chr2:32135436 | 5.40E-43 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam11g1928 | - | - | - | 0.0 |