Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00019 ATGGGATCGATAGAGGAGGGAACAAATTACCTATCTGACGAAGATATTCCATTGAAGGGAACACCAGTTGCGAAAAACTTATCGCATAGCTTTGACTGTGAGACGGTTCATGTGCGTTCCTCCCCAGATGATAAAAGATGGTGGAAGACTAACAACATTCGTTTTAGACCTCTTGAAAGTGCTAAAATAGTGTTGATTAAAGCAAAGATCAACGTGTTACTTCCTTTTGGTCCTTTGGCAATCCTGCTACATTATTTAACTGGAAAGCATGGTTTGGTCTTCTTTTTCACGTTACTTGGAATTACACCTTTGGCAGAACGTCTTGGTTATGCTACAGAGCAGCTTGCTTCCTATACTGGTCCAACAGTTGGTGGTCTTTTGAATGCAACATTTGGAAATGCAACCGAAATGATTATATCGATTTATGCATTAAAGAGTGGGATGATTAGGGTTGTTCAACAGTCGTTATTGGGATCAATCTTGTCGAATATGCTCCTAGTGCTTGGTTGCGCTTTCTTCACTGGTGGGATTGTTCATCATAAGAATGTGCAGACTTTCAATAAGGGTACTGCTGTTGTGAATTCAGGATTGTTGTTAATGGCTGTTATGGGAACAACGTTTCCGGCTGTGCTTCATTTCACTCACACAGAACTTCATTCTGGAGAGTCAGCATTGTCTCTTTCAAGGTTTAGCAGTTGTATAATGTTAATTGCATATGCAAGCTTCCTTTTCTTTCAACTAAAAAGTCAGCACAATCTCTATGGTTCTCTTGATGAGGAAGGTGATGGTGAAGTTGAGGAGGATCCTGAGATTTATGCTTGGGAAGCAATTGGGTGGCTTGCTATCTTGACTGTATGGGTATCGATTTTATCTGGATACCTTGTTGATGCTATCGAGGGAGCATCTGAATCATTACATTTGCCAGTGGCTTTTATAAGTGTAATTTTGTTGCCAATAGTTGGAAATGCTGCTGAACATGCAAGTGCAATCATGTTTGCCATGAAGGATAAGCTTAACATCACCCTTGGAGTTGCTATTGGATCATCAACACAAATATCCATGTTTGTGATCCCATTTTGCGTCGTTGTTGGATGGTGTATGGGAATACCAATGGACTTGAACTTTAAACTCTTTGAGACTGCAACTCTGTTTATAACTGTGCTAGTGGTGGCCTTTATGTTGCAGGAGGGGACGTCAAATTATTTCAAAGGTCTAATGCTTATTCTATGCTACCTCATTGTGGCAGCCAGCTTCTTTGTACATGTTGACCCTAGCAGTGGTGAGTAG 1287 40.71 MGSIEEGTNYLSDEDIPLKGTPVAKNLSHSFDCETVHVRSSPDDKRWWKTNNIRFRPLESAKIVLIKAKINVLLPFGPLAILLHYLTGKHGLVFFFTLLGITPLAERLGYATEQLASYTGPTVGGLLNATFGNATEMIISIYALKSGMIRVVQQSLLGSILSNMLLVLGCAFFTGGIVHHKNVQTFNKGTAVVNSGLLLMAVMGTTFPAVLHFTHTELHSGESALSLSRFSSCIMLIAYASFLFFQLKSQHNLYGSLDEEGDGEVEEDPEIYAWEAIGWLAILTVWVSILSGYLVDAIEGASESLHLPVAFISVILLPIVGNAAEHASAIMFAMKDKLNITLGVAIGSSTQISMFVIPFCVVVGWCMGIPMDLNFKLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVAASFFVHVDPSSGE 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 106379 110627 - Carg04339-RA Car01g00019 140883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00019 428 Pfam Sodium/calcium exchanger protein 92 247 IPR004837 GO:0016021|GO:0055085
Car01g00019 428 Pfam Sodium/calcium exchanger protein 277 416 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00019 Car-Chr1:106379 Car02g00199 Car-Chr2:1195676 0 dispersed
Car01g00019 Car-Chr1:106379 Car14g01084 Car-Chr14:9526489 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00019 K07300 - csv:101219432 761.525