Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00043 ATGGAAGAGATGCCTTCTTCTGTTTCTTTGACCCTTAGTTTAGGCAATCCAAAGTCTGATACATCAGGAAGTCCTAGCCATGTCGAATTTACGCGGCTAAAGTTGGTGACAGACAAGGTAAATTTGTTCTCTGCATCGACCGCTGACTCGGGTCCTATTAGTAATGGTAGTTGCCATGGTTTTAGTGGTATAGTCGATAGCATAACCGTGTCGCAACCAAGTGATAGTAGTCAAGGTCGAGACGGTTTTTGGGGGTTGTTGCCGACGAATGGTGTAAGTTTGACTGTCGATAAGGAAGATGCTAGCTTATCTACTATGGGTGACCCTGATGAAATGATAGATGATGGGTTGTTTGCTATTGATGGTGGTTCTAATCTTAATGTACAAGAAGTTGTCAAGATTGGAGATGTGAGTAATGGTCATGTTGTTGCCAAGGCTATTATCTTGGTGGAATCAGGGAAGATTCCTACTAGTGAACTTATTGTGGCAACGGTAAGCTCCGATTGCTCCGATTTAGAAGTATCGACATCGTCAGAGCTAAAAGCCCCTGCGGTGGTTTTCCAATCGAAAGGGGGGGATGGTGTTCATAAAGGCATTCGGAGTGTCTTTGAGCGGGATTGTGTACCCCTTTGGGGGTCGGTATCGATTTGCGGTAGAAGACCAGAAATGGAGGATGCAATTGCTGTGGTTCCTTGTTTTTCTAAGGTTCCTATCAGAATGCTTGTGGGAAATGGAATGCTTAATGGAATGGGTCAAAGTTTAACACATCTCAACAGCCATTTTTTTGGTGTTTATGATGGACATGGCGGCTCTCAGGTTGCGGATTATTGTCGAGAGCGCGTACACTTAGCATTAGCTGAAGAGATTAAAGGATTTAAGCAAAATCTAAATAATGGAAGCAATGGAGAAAACTGGGAGAAGGATTGGGAGAGAACCTTTAACAATTGCTTTGTTAGAGTGGATGATGAAATAGAAGGAAAAGTTGGTAGCTTCAAACCTGTTGCCCCGGAAACTGTTGGCTCTACTGCCGTTGTTGCCTTGGTCTGCTCATCACACATCATAGTTGCAAACTGTGGTGATTCTAGAGCTGTTCTATGCCGTGGCAAAGAACCGATGGCGCTATCGGTCGATCATAAACCAAATCGTGAAGATGAATACGCTCGGATTGAATCATCTGGAGGCAAGGTCATCCAGTGGAATGGACATCGCGTGTTCGGAGTTCTTGCAATGTCAAGATCCATTGGTGATAGATATTTGAAGCCATGGATCATTCCCGACCCGGAAGTCATGTTTGTTCCTCGAGCGAAAGAAGATGAATGTCTTATTTTAGCCAGTGATGGCCTGTGGGATGTGATGACAAATGAGGAAGTCTGCGAAGTGGCTCGAAGGCGGATTCTTCTTTGGCACAAGAAACACGGAGCTTCATCGCTCACGGATCGGGGCATGGGAGTTGACCCAGCTGCACAAGCTGCAGCAGATTACCTCTCAATGCTTGCTCTCCAAAAGGGAAGCAAAGACAACATCTCTGTGATTGTAGTAGACTTGAAAGCTCAAAGGAAGTTCAAGACCAAATCATGA 1578 44.87 MEEMPSSVSLTLSLGNPKSDTSGSPSHVEFTRLKLVTDKVNLFSASTADSGPISNGSCHGFSGIVDSITVSQPSDSSQGRDGFWGLLPTNGVSLTVDKEDASLSTMGDPDEMIDDGLFAIDGGSNLNVQEVVKIGDVSNGHVVAKAIILVESGKIPTSELIVATVSSDCSDLEVSTSSELKAPAVVFQSKGGDGVHKGIRSVFERDCVPLWGSVSICGRRPEMEDAIAVVPCFSKVPIRMLVGNGMLNGMGQSLTHLNSHFFGVYDGHGGSQVADYCRERVHLALAEEIKGFKQNLNNGSNGENWEKDWERTFNNCFVRVDDEIEGKVGSFKPVAPETVGSTAVVALVCSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYARIESSGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPDPEVMFVPRAKEDECLILASDGLWDVMTNEEVCEVARRRILLWHKKHGASSLTDRGMGVDPAAQAAADYLSMLALQKGSKDNISVIVVDLKAQRKFKTKS 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 228882 230737 + Carg04315-RA Car01g00043 140907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00043 525 Pfam Protein phosphatase 2C 236 508 IPR001932 -
Car01g00043 525 ProSiteProfiles PPM-type phosphatase domain profile. 210 515 IPR001932 -
Car01g00043 525 ProSitePatterns PPM-type phosphatase domain signature. 261 269 IPR000222 GO:0043169
Car01g00043 525 MobiDBLite consensus disorder prediction 1 26 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00043 Car14g01106 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00043 Car-Chr1:228882 Car05g00358 Car-Chr5:2072008 0 dispersed
Car16g00056 Car-Chr16:379458 Car01g00043 Car-Chr1:228882 8.38E-75 transposed
Car01g00043 Car-Chr1:228882 Car14g01106 Car-Chr14:9805623 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00043 K14497 - csv:101203499 919.072