Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00080 ATGCCGATGAGGGGGAAATCCGGGAAGAAGCCACTGAGGGATGTATCGAACCAAAAATACGGCCGAACTTCCTCCAAATCTGTCGCTACTGCTAAGAGAAAGGAAGATGGTTACAAGTCTAAGGTTGAAGAGCAAGATGATGCTCTCGATCGTCTCCTTCTGGTTCAGTCCGATCTCTCAGCGTTCACTAATCAGATTGATGAACTTGCTGTGAAAGCATTTGAACTGAAGGAAATGGGGAAACAAGGGAGGAAACAGATCGAATCTTTCACTCATATCTTATCTGATATGCTATCTTCTTTGAAGCCATGGGTTCCCAGACTTCAGAAGGTGCTCTCTTCTCCATCAAAAGGTATTGATGGTGATATAGAACAACCCTTGTCTAGTGAAAGCAATGTGATGGTTAACGATACGGAGAACAGTGTTATTGACAGCCCAGACCAAGCTGAAGTTCGAGATCTGATCTCTCCTTCACCCCTCGTATCATGGCGTGCTGGATGCAATATTGAGAGAGGAAGACAATTGTTTTTACTCACACCTCTTCCTATTTCTAAATCACTCTCATCTAAACATGTGAAATATTCTAAATCTGCACTTAGTGGAATGACTTCGAGCATAATCGAGGGCGCACAACCATGTTTTATTGCATGTAGAGATTTAAACGAGAATGAACTTGAAGGTCAAATACTTGAGCCTGGCAAGCCTTCTGGTCCTGATTTAACAACACTAGGGGAGAATCTGCTTGAAGGTAATGGAATTGCGCCAAGTACTGGTAAGCCATCTGGGTCTAATTTAACTAAACTGGGGGAGAATTTGTTAGAAGGAAATGGAATTGTGCTTAGTGGTGTTGAGCCTTCTGGGTCTGATATAGCACAAGTTGAGATAACTCATCAGCGTGGATTTGCATCCCCACCTATGTTATCAAAGAAAAATTGCTCTATGCTAGTTATGACTCCCTGCTTAAAAATGTCGCCTCCAAAATCTTGTGTGCTGCTCGAACCCATTTCTGAGTCATCACATAAAGACAAAAAAATGGTTTATAAGGCCACACCTTTTCCCGTTGGAGTTCAGGATTACTCCTCCGGCGGTGACGCTTCTGATGGACTGGCTTTAAAGTACCCAGAACTCTTGGGAATTCAACAGGCTCACAAATTAGAAACTAGAAAGGAGGTTGAAGCCTCACCAGACTGGTTTATGTCACCTCCAAAAACATGTGTTTTACTGGAGCCGTCTGATTTTCATTCAGTGAAAAGTGCTGCTTGTTACGGATGTCACGAAGCCAAGAAATCTTTTGGCGACGAAGGTCCAGTTGGGGTCAGCTTGCCGCACATAGATAGCACTCCCATGTTGAAGGAATGTGAAAGTGTATTTCGGGTTGGCAAACGTGCTGGCGAAGAGACTCTTAAAAAAGAACTCTGGCTGAAATTTGAAGCAGCATCAGCCAATCCATATCGTTTTGATCAAGCTCTTCAAAAGACATCAAAGAAAGGTTTCCTGGACATGCTGGACGAGGTTTCATGTGATTAG 1527 43.29 MPMRGKSGKKPLRDVSNQKYGRTSSKSVATAKRKEDGYKSKVEEQDDALDRLLLVQSDLSAFTNQIDELAVKAFELKEMGKQGRKQIESFTHILSDMLSSLKPWVPRLQKVLSSPSKGIDGDIEQPLSSESNVMVNDTENSVIDSPDQAEVRDLISPSPLVSWRAGCNIERGRQLFLLTPLPISKSLSSKHVKYSKSALSGMTSSIIEGAQPCFIACRDLNENELEGQILEPGKPSGPDLTTLGENLLEGNGIAPSTGKPSGSNLTKLGENLLEGNGIVLSGVEPSGSDIAQVEITHQRGFASPPMLSKKNCSMLVMTPCLKMSPPKSCVLLEPISESSHKDKKMVYKATPFPVGVQDYSSGGDASDGLALKYPELLGIQQAHKLETRKEVEASPDWFMSPPKTCVLLEPSDFHSVKSAACYGCHEAKKSFGDEGPVGVSLPHIDSTPMLKECESVFRVGKRAGEETLKKELWLKFEAASANPYRFDQALQKTSKKGFLDMLDEVSCD 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 440943 443771 + Carg04278-RA Car01g00080 140944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00080 508 MobiDBLite consensus disorder prediction 28 43 - -
Car01g00080 508 MobiDBLite consensus disorder prediction 1 43 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00080 Car14g01142 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00080 Car-Chr1:440943 Car14g01142 Car-Chr14:10060333 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00080 - - mcha:111021026 762.296