Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car01g00097 | ATGGATTTCTGGCCGGAATTTCTCGCTAGCAGTTGGGGAAAAGAGTTCGTCGGCGGCGGAATCGGCGGCGTTGCAGGCGTCGTCTCCGGCTACCCACTCGACACCCTCCGCATTCGTCAACAACACTCCACCTCCGGTTCCGCCCTCAGCGTCCTCCGCAACATCGTGTCCAATGGCGGCCCCACCGCTCTCTTCCGAGGAATGGGTGCTCCACTCGCTTCCGTCACTTTCCAGAACGCCGTTGTTTTCCAGACAAACGCCGTGCTCTGCAGTGTGATCGATCCGGCGGCGAGTCAAACCCGTCCGCCGTCGTACAAGGCGGTGGCATTAGGCGGATTCGGCACCGGAGCATTACAGAGCCTAATTTTAACACCCGTAGAGCTCGTCAAAATCCGTCTTCAATTACAGGATTTGGGAAATTCAAGCCACTCAGACGTGGGTTCGTCTCGGCCCGGGCCGATGCAGGTTGCGAAGAACATTTTCAAAACCGAAGGCTACAGAGGGCTATACAGAGGCTTAACGATCACGATGCTCAGAGACGCTCCTTCACACTGTTTCTACTTCTGGACTTACCAATTCATGAGAGAAAAGCTTCATCCCGGCTGCAGAAACACCGGACAAGAGTCCTTGAGAACGATGATCGTCGCCGGCGGACTCGCCGGCGTCGCCAGTTGGGTTTGCTGTTACCCACTTGACGTTGTGAAAACCAGACTTCAAGCTCAGTCAAAAATTTCGTTTCAAAAGTACAATGGAATCATGGATTGTTTCTACAAGAGCATCAAGGAAGAAGGGTACAGTGTTTTGTGGCGTGGATTGGGAACTGCCATTGCCAGAGCTTTTGTGGTTAATGGCGCCGTTTTCTCTGCTTATGAGCTCAGTTTGAGGTGTCTGTTCAGCAATGGCGGATTGCATGCTGATCATACGATTTGA | 930 | 53.01 | MDFWPEFLASSWGKEFVGGGIGGVAGVVSGYPLDTLRIRQQHSTSGSALSVLRNIVSNGGPTALFRGMGAPLASVTFQNAVVFQTNAVLCSVIDPAASQTRPPSYKAVALGGFGTGALQSLILTPVELVKIRLQLQDLGNSSHSDVGSSRPGPMQVAKNIFKTEGYRGLYRGLTITMLRDAPSHCFYFWTYQFMREKLHPGCRNTGQESLRTMIVAGGLAGVASWVCCYPLDVVKTRLQAQSKISFQKYNGIMDCFYKSIKEEGYSVLWRGLGTAIARAFVVNGAVFSAYELSLRCLFSNGGLHADHTI | 309 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 505834 | 507148 | - | Carg04260-RA | Car01g00097 | 140961 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car01g00097 | 309 | Pfam | Mitochondrial carrier protein | 11 | 88 | IPR018108 | - | |
| Car01g00097 | 309 | Pfam | Mitochondrial carrier protein | 212 | 299 | IPR018108 | - | |
| Car01g00097 | 309 | Pfam | Mitochondrial carrier protein | 109 | 198 | IPR018108 | - | |
| Car01g00097 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 208 | 296 | IPR018108 | - | |
| Car01g00097 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 10 | 92 | IPR018108 | - | |
| Car01g00097 | 309 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 103 | 197 | IPR018108 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car01g00097 | Car08g00582 | CCT | |
| Car01g00097 | Car17g00746 | CCT | |
| Car01g00097 | Car14g01160 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car01g00097 | Car-Chr1:505834 | Car16g01093 | Car-Chr16:9384902 | 2.03E-50 | dispersed | |
| Car01g00097 | Car-Chr1:505834 | Car14g01160 | Car-Chr14:10171679 | 0 | wgd | |
| Car01g00097 | Car-Chr1:505834 | Car17g00746 | Car-Chr17:6665778 | 4.68E-139 | wgd | |
| Car01g00097 | Car-Chr1:505834 | Car08g00582 | Car-Chr8:3825606 | 1.47E-149 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car01g00097 | K15109 | - | csv:101222749 | 558.91 |