Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00144 ATGCTGAAGCTGGTCTTGAAAGGGGGAAGTAGGCCGCCATGGGTGGGCTTGGCTGCTGCTGTTTGGGTTCAAATAGCTAGTGCTTCTTCTTATAACTTTTCTCTTTATTCCCATTTCCTTAAATCCGTTCTGGGTTTGAATCAGCAGCAGCTTACGATACTCGGAGTGGCTAATGACATCGGGGAGAGCGTGGGGCTGCTTCCTGGACTTGCTTGCAACATATTTCCTCCTTGGGCATTGGTTTTGGTTGGTTCTGTGTGTTGTTTTGTGGGCTATGGAGCTATTTGGCTTGCTGTTAGCAGAACTCTCCCCAGTATGCCTTATTGGCTGCTATTTCTCACACATTGTATTGCTACAAATAGCAATGCATGGTTCGCAACGGCTGTGCTGGTAACCAACATGAGGAACTTCCCGCTCAGCAGAGGTACTGTTGCTGGCATTCTGAAAGGCTATGCCGGGCTTGGTGCTGCTGTATACACAGTGATATACAGCTTGGTTTTCAGGAAGTCAGCTTCGGATCTGCTGCTGTTTCTTGCAATAGGGATACCCATTTTTTGCATAGCCTTGATGTACTTTGTTCGGCCTTGTACTCCGGCTGCTTCAGAGGATCCATTTGAGCGTGGCCATTTTCTTTTCACACAAGCTGCTTGTGTCTCGCTAGCTGTTTTTCTAGTCTCCACCACAATTCTATATGCAAAAACCACCCCTAGTGATGCTGTGGCATACCTCTTAGTTGCCATAATGGTTGTTCTGTTAATGTCTCCTCTTGCAGTTCCCATAAAAATGACCATTTCTTCTACAAAGACGAAGAAACTCGAGCCTCGAGTTGAATCTGCCGAAGCTTTAGCTTCTGGAGAAAGCGATTCGTCGTCCGAAATAGAACCCTTATTGACACCATCTTCCTCATCTACAAATCTTAAAAGTTTCTATGAGAATGATGATGATGGATCAGATGCAGAAACACTTCTTGCTTTAGGAGAGGGGGCCATTCATAAGGAGAAGAGAAGACCTAAAAGAGGGGAAGATTTCAATTTCCATGAAGCTGTTATCAAAGCTGATTTTTGGCTGCTTTGGTTCTCGTACTTCCTCGGGGTCGGTCCGGGAATAACGATTCTCAACAATTTGTCTCAAATTGGGATTTCTTTAGGTGTTAACGACTCGACGTTGCTGTTGGCTCTTTTCAGCTTATGCAACTTTATCGGTCGTTTAGGCTCCGGTGTTATTTCCGAACACTTCGTCAGGTCAAGAATGATACCACGGTCGCTGTGGATGATGTTTGCACTGATACTCATGGCTATAGCATTCCTCCTATATGCGTCTGGCCTCACGGGTACTCTCTACATTGCCACAGGTTTCACTGGTATCAGTTTTGGAGTTCTATATTCTATGATGATCCCTATGGCATCTGAGATTTTTGGCCTCAAGAACTTTGGAGTGATCTTAAACTTCATGCTGCTGGGGAATCCAATTGGAGCAGCTCTTTTCTCAGTTTTTCTAGCCAGTACTTTATACGACATTGAGGCTGCGAAGCAAGGTTCGATAACCTGCATCGGCCAACAGTGTTTTAGAATCACTTTTTTCGTTCTTTCAGGCGTGGCGGGGTTCGGTTCGATCTTAAGCTTAATTCTTACCATTCGATTGAGGCCAGTCTATCGAATGCTTTACTCCAGTGGTTCATTCCGCTTGCCTCTAAGTACAGTTTATTGA 1707 45.05 MLKLVLKGGSRPPWVGLAAAVWVQIASASSYNFSLYSHFLKSVLGLNQQQLTILGVANDIGESVGLLPGLACNIFPPWALVLVGSVCCFVGYGAIWLAVSRTLPSMPYWLLFLTHCIATNSNAWFATAVLVTNMRNFPLSRGTVAGILKGYAGLGAAVYTVIYSLVFRKSASDLLLFLAIGIPIFCIALMYFVRPCTPAASEDPFERGHFLFTQAACVSLAVFLVSTTILYAKTTPSDAVAYLLVAIMVVLLMSPLAVPIKMTISSTKTKKLEPRVESAEALASGESDSSSEIEPLLTPSSSSTNLKSFYENDDDGSDAETLLALGEGAIHKEKRRPKRGEDFNFHEAVIKADFWLLWFSYFLGVGPGITILNNLSQIGISLGVNDSTLLLALFSLCNFIGRLGSGVISEHFVRSRMIPRSLWMMFALILMAIAFLLYASGLTGTLYIATGFTGISFGVLYSMMIPMASEIFGLKNFGVILNFMLLGNPIGAALFSVFLASTLYDIEAAKQGSITCIGQQCFRITFFVLSGVAGFGSILSLILTIRLRPVYRMLYSSGSFRLPLSTVY 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 743951 746531 - Carg04212-RA Car01g00144 141008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00144 568 MobiDBLite consensus disorder prediction 283 306 - -
Car01g00144 568 MobiDBLite consensus disorder prediction 281 306 - -
Car01g00144 568 Pfam Nodulin-like 13 260 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00144 Car-Chr1:743951 Car15g00079 Car-Chr15:480618 3.20E-117 dispersed
Car01g00144 Car-Chr1:743951 Car14g01199 Car-Chr14:10478740 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00144 - - mcha:111020929 921.383