Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00149 ATGACCGATATCAGCTTGGAGGAGATCAAGAATGAGAACATTGATCTTGAGCGCATACCAGTTCAGGAAGTGTTTGAGCAATTGAAATGCTCCCGAGATGGTTTGTCCTCAGAGGAGGGGCGCCAGAGGCTTCAGCTCTTCGGCCCAAATAAGCTTGAAGAGAAAAAGGAAAATAAGTTTCTGAAGTTTCTTGGTTTTATGTGGAATCCACTTTCATGGGTTATGGAAGCTGCAGCTGTCATGGCCATTGTGCTTGCCAATGGAGGGGGGCAACCACCGGATTGGCAGGACTTTGTGGGTATTACTGCACTGCTTATTATCAATTCCACAATCAGCTTTATAGAGGAAAACAATGCAGGCAATGCTGCAGCAGCACTTATGGCCGGTCTTGCACCAAAAACCAAGGTCCTTCGTGACGGAAAATGGTGTGAGGAAGAGGCTGCAATCTTAGTTCCGGGAGATGTTATCAGCATTAAGTTGGGAGATATCATTCCAGCAGATGCCCGTTTGTTGGACGGTGATCCTCTTAAGATTGATCAGTCAGCACTTACCGGGGAGTCTTTGCCAGTTACAAGGTGCGCTGGTGATGAAGTGTTTTCTGGTTCCACCGTCAAGCAGGGTGAGATCGAGGCTGTTGTAATTGCTACTGGCGTCCACACCTTCTTTGGAAAGGCTGCTCATTTGGTTGATAGCACAAATCAAGTGGGACACTTCCAAAAGGTGTTGACTGCCATTGGAAACTTCTGTATTTGCTCGATTGCTGTGGGGATGGCGATAGAGATAGTAGTGATGTATCCAATTCAACATCGTCGATATAGAGATGGGATTAACAATCTCTTGGTGCTTCTCATTGGGGGGATTCCAATTGCCATGCCAACAGTGTTGTCAGTCACAATGGCCATTGGTTCTCATAGGTTATCCCAGCAGGGTGCTATTACAAAGAGAATGACGGCCATTGAAGAGATGGCTGGAATGGATGTACTCTGCAGTGATAAGACTGGAACTCTAACTCTCAACAAGCTTACAGTTGACAAATCCATGATTGAGGTGTTCGTTAGAGATGTCGACAAAGATACTGTAATTTTGCTTGGTGCTAGAGCTTCCAGGGTTGAGAATCAAGATGCTATTGATGCTTGCATTGTTGGCATGCTAGGCGATCCTAAGGAGGCCAGAGAAGGCATTAAAGAGGTCCATTTCTTGCCCTTTAACCCTGTAGACAAGCGTACAGCTATTACATATATTGATAACGATGGCAATTGGCACAGAGTGAGCAAAGGAGCACCGGAGCAGATTATCGAGCTCTGTGACCTCCGGGAAGATATTAAGAAGAAGGCTCATTCAATTATCGACAAATTTGCTGACCGTGGTCTTCGTTCTCTTGCTGTTGGCAGACAGACCGTTCCAGAAAAATCCAAAGATGCTGCTGGAGGACCGTGGCAATTTGTTGGTCTCTTGCCTCTCTTTGACCCTCCAAGGCATGACAGTGCAGAGACAATCCGAAGGGCACTTAATCTTGGTGTCAACGTTAAGATGATCACCGGTGACCAACTGGCCATTGGGAAGGAAACTGGGCGCAGGCTTGGAATGGGCACAAACATGTATCCATCTTCCTCCCTCCTTGGACAAAGCAAGGACGAATCAATTGCTTCTTTGCCTGTTGATGAGCTTATTGAGAAGGCTGACGGATTTGCAGGCGTCTTCCCCGAGCACAAATATGAAATTGTGAGGAGACTTCAAGAAAGGAAGCATATCTGTGGGATGACAGGAGATGGCGTGAATGATGCTCCAGCATTGAAGAAGGCAGACATAGGAATTGCAGTGGCTGATGCAACTGATGCGGCAAGAAGTGCTTCTGATATAGTCTTGACAGAGCCAGGACTGAGCGTGATTGTCAGTGCTGTTTTAACAAGTAGAGCCATTTTCCAGAGGATGAAGAACTACACCATCTACGCAGTTTCAATCACCATCCGTATTGTGTTGGGCTTTATGCTTATTGCACTCATTTGGAAATTTGACTTCTCCCCTTTCATGGTTCTTGTCATAGCCATTCTCAATGATGGCACCATCATGACCATCTCTAAAGACAGAGTAAAACCTTCCCCTCTTCCTGATTCATGGAAGCTCCGCGAGATCTTTGCAACTGGAGTTGTTTTGGGCTCTTACTTGGCCGTTATGACTGTTGTTTTCTTCTGGATCATTAACACCACTGATTTCTTTTCGGATAAATTTGGTGTCCGTTCCATCAGAGAAAATAGGGCTGAGCTCACAGCAGCTGTGTATCTTCAAGTTAGCACAGTCAGTCAGGCACTCATTTTCGTCACAAGATCTCGAAGCTGGTCATTTATTGAACGCCCTGGTCTACTCCTCGTGTTTGCATTCTTCGTGGCACAGCTGGTGGCTACCCTCATTGCTGTGTATGCGAACTGGGATTTTGCGGTTATGAAAGGGATTGGATGGGGATGGGCTGGAGTGATCTGGATCTACAGCATAGTCTTCTACATTCCTCTGGACGTTCTCAAGTTCGCCACTCGATATGCATTGAGCGGCAAGGCTTGGGACAATATGCTCCAAAACAAGATTGCTTTCTCATCAAAGAAGGATTATGGCATTGGAGAGAGAGAGGCTCAATGGGCTGCAGCTCAACGTACCCTTCACGGCCTGCAGCCTCCCGAAATGTCAGAGCTCTTCAATGACAAGAGCAATTACAGGGAGTTGTCTGAAATCGCAGAGCAAGCCATGAAGCGTGCTGAGGTTGCAAGGTTGAGGGAGCTTCATACATTGAAGGGGCATGTTGAATCGGTGGTGAAGCTAAAGGGATTGGACATTGAAACGATCCAACAACACTATACTGTTTGA 2856 46.46 MTDISLEEIKNENIDLERIPVQEVFEQLKCSRDGLSSEEGRQRLQLFGPNKLEEKKENKFLKFLGFMWNPLSWVMEAAAVMAIVLANGGGQPPDWQDFVGITALLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWCEEEAAILVPGDVISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTRCAGDEVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMAIEIVVMYPIQHRRYRDGINNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSMIEVFVRDVDKDTVILLGARASRVENQDAIDACIVGMLGDPKEAREGIKEVHFLPFNPVDKRTAITYIDNDGNWHRVSKGAPEQIIELCDLREDIKKKAHSIIDKFADRGLRSLAVGRQTVPEKSKDAAGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASLPVDELIEKADGFAGVFPEHKYEIVRRLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLIALIWKFDFSPFMVLVIAILNDGTIMTISKDRVKPSPLPDSWKLREIFATGVVLGSYLAVMTVVFFWIINTTDFFSDKFGVRSIRENRAELTAAVYLQVSTVSQALIFVTRSRSWSFIERPGLLLVFAFFVAQLVATLIAVYANWDFAVMKGIGWGWAGVIWIYSIVFYIPLDVLKFATRYALSGKAWDNMLQNKIAFSSKKDYGIGEREAQWAAAQRTLHGLQPPEMSELFNDKSNYRELSEIAEQAMKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 951
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 761718 766072 - Carg04207-RA Car01g00149 141013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00149 951 Pfam Cation transporter/ATPase, N-terminus 19 81 IPR004014 -
Car01g00149 951 Pfam haloacid dehalogenase-like hydrolase 325 602 - -
Car01g00149 951 ProSitePatterns E1-E2 ATPases phosphorylation site. 331 337 IPR018303 -
Car01g00149 951 Coils Coil 902 922 - -
Car01g00149 951 Pfam E1-E2 ATPase 131 308 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00149 Car-Chr1:761718 Car12g00275 Car-Chr12:1821076 0 dispersed
Car13g00763 Car-Chr13:8589252 Car01g00149 Car-Chr1:761718 0 dispersed
Car14g01194 Car-Chr14:10464470 Car01g00149 Car-Chr1:761718 1.86E-115 transposed
Car01g00149 Car-Chr1:761718 Car10g00450 Car-Chr10:2261931 0 wgd
Car01g00149 Car-Chr1:761718 Car14g01193 Car-Chr14:10462319 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00149 K01535 - csv:101212751 1741.09