Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00157 ATGGACACAGAGGAAGTTCCTTCGCCTGTGACGCCGGGGACGCCTGGAGCCCCACTGTTTGGAGGACACAAGGGGAATCACCATGGAAGTGAGAATGGTAAAAGGTCTCTTCTCAAGAGCTGCATCTCCTTCAATGTTGATGATTGGGGCACCGAAGAAGGAAGCTTATCTAAAGTCTCACTTGCAAGGAAGGTAACCCTACAAGGAAAGGTCATTTTGGTAGCTAAAGTTGGAGCGGAGTTCATTGGCACTCTGATGCTCATCTTTGCTGGAACTGCCACTGCTATCGTGAACCAAAAGATACAAGGAACTGAAACGCTCATTGGCCTAGCAGCCTCCACAGGCATGGCAGTGATGGTTGTCATCTTATCGACCGGCCACATCTCCGGAGCCCATCTGAACCCAGGCATCACCATTGCTTTCGCTGCACTAAAGCACTTTCCATGGAAGCAGGTGCCGGTGTATATTGGAGCTCAAATAGTAGCTTCTCTATGTGCGTCATTTGCATTGAAATGGATATTTGATCCCTTTATGGGTGGAGGAGTGACTGTTCCTTCATGTGGATATTCTCAAGCTTTTGCTCTTGAGTTTATCATTAGCTTCAACCTCATGTTTGTCATTACCGCCGTTGCCACCGATACTCGGGCTGTGGGAGAGTTGGCGGGAATCGCGGTGGGAGCAACAGTCATGCTCAATGTCCTCATCGCCGGGGAAACGACTGGAGCTTCAATGAATCCAGTGAGAACACTGGGGCCAGCCATTGCTGCAAACAATTTTAGAGCCATATGGATTTACCTCACAGCTCCCATACTAGGGACATTGTGTGGAGCTGGAATCTACACTGCAATTAAGTTGCCTGACCAAGATGGCGATGCACGCTTGCCTTCCACTGCAAGAAGCTTTCGAAGATGA 912 49.23 MDTEEVPSPVTPGTPGAPLFGGHKGNHHGSENGKRSLLKSCISFNVDDWGTEEGSLSKVSLARKVTLQGKVILVAKVGAEFIGTLMLIFAGTATAIVNQKIQGTETLIGLAASTGMAVMVVILSTGHISGAHLNPGITIAFAALKHFPWKQVPVYIGAQIVASLCASFALKWIFDPFMGGGVTVPSCGYSQAFALEFIISFNLMFVITAVATDTRAVGELAGIAVGATVMLNVLIAGETTGASMNPVRTLGPAIAANNFRAIWIYLTAPILGTLCGAGIYTAIKLPDQDGDARLPSTARSFRR 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 793675 796021 - Carg04200-RA Car01g00157 141021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00157 303 MobiDBLite consensus disorder prediction 1 32 - -
Car01g00157 303 Pfam Major intrinsic protein 74 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00157 Car-Chr1:793675 Car15g01216 Car-Chr15:9490964 1.43E-106 dispersed
Car01g00157 Car-Chr1:793675 Car02g00717 Car-Chr2:5325534 8.29E-125 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00157 K09874 - csv:101207376 501.901