Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00159 ATGCCACTTGCCGCCGCAACAGCCGCCGTAGCTTCCGGCCAAACTGTTTGTGTCACCGGTGCTGGTGGCTTCATTGCCTCGTGGCTCGTGAAGCTCCTTCTCCAAAAGGGTTACAACGTTAGAGGCACTGTCAGAAACCCTGATGATTCGAAGAATGCTCATTTGAAAGTGCTTGATGGAGCTAAGGAAAGGCTAACGTTGTATGCTGCTGATCTTCTTCATTTTGAGAGCCTTAAAGCCGCCATTCTCGGCTGTGACGGTGTTTTCCACACTGCATCACCGGTAACCGATGACTTTGAAAAGGTGGATGAAGCAATAATTGGAACAAAGAACGTCATAACGGCGGCGGCCGAGGCCAAAGTCCAACGGGTTGTTTTCACGTCGTCGATTGGGACCGTGCACATGAACCCTAATCGGAGCCCGGACATAGTGGTTGATGAGTCTTGTTGGAGTGACCTTCACTTTTGCAAAAACACTAAGTATTTGACAGGGTCAGTCAAGACCTATGTGAATGCAGTTCAAGGTTATGTTCATGTTAAGGATGTTGCAAAGGTTCACGTTTTGGTTTACGAGACTCCCTCTGCCTTCGGTAGATATATTTGTGCCGAAACTATGCTTCATCGTGCAGAATTGGTTGAAATTTTGGCTAATTTGTTTCCCGAGTATCCCGTTCCTACCAAGTGCTGTGATGAGAAGAACCCTAAGAAGAAAGCTTACAAATTTAGTGTAAAAAAGGTTAAGGACTTGGGCATGGCCGAGTTCATACCTGTGAAGCAATGCATATATGAAACTGTGAAGAGTCTTCAAGAGAAGGGTCATCTTCCAACTCAACCTTGTCAATCTACCACCTCTGCAGTTTCAGGCCACACGGTGTGTGTCACCGGCGCCGGAGGCTTCATTGCTTCTTGGCTTGTGAAGCTCCTTCTCCAAAAGGGCTATACTGTTAGAGGAACTGTCAGAAACGCTGATGATCAAAAGAATGCTCATTTGAAAGAGCTGGAAGGAGCTAAAGACAGGCTGTCTTTGTTCAGTGCTGATCTTCTTGATTTTGATAGCCTTAAAGCTGCCATTACCGGCTGCGATGGCGTCTTCCATACCGCCTCTCCGGTCACCGACGATCCCGAAAAGGTGGAACAAGCCATAATTGGGACAAAGAACGTCATGGCTGCCGCTGCCGAAGCTAAAGTTCGACGGGTAGTGTTCACGTCGTCGATCGGTACCACAATAGCTGAACAGACAGCATGGGAAGTGGCAAAAGAACAAGGAGTGGATTTGGTAGTGGTGAATCCAATGCTGGTTTTGGGGCCTTTGCTGCAAGCTGGTGTGAATGCAAGCGTTGTTCATATAATGAAGTATCTGACAGGATCTGCAAAGACATATGTAAATGCTGTACAAGGTTACGTGGATGTTAAGGATGTTGCAAAAGCTCATGTTTTGGTCTATGAAACTCCTTCAGCTTCAGGCAGATACATCTGTGTGGAAAGCATGCTTCACCGTGGTGAATTGGTTGAGATTCTTACCAAGTTCTTCCCTGAATATCCCATTCCGACCAAGTGTTCTGATGAGGTGAATCCCAAGAAGAAACCTTACAAGTACACTGTGGAGAAGCTGAAGTCATTGGGAATGGAGTTTACACCTATCAAACAATGCATATATGAAACTGTGAAGAGCTTACAAGAAAAGGTTTACATCATTGGTTGTTCTAATTCTCTGAGGCAATTGCATGCTTACTGTTTCTTCGCTCGGGAGCTCAAGCTTCATTGGGATCATCTAACAAAAGGGAAAAAAAACGAGTGTTATAGAGAAGCTCCTTGGATTAGTCGAAATTACCGCAAGGGAGTTGACATGTGGACCCATCTTCGTCTGGCTGCTCGTAAACTTCAAAAGGGGAATGAGAGCAAAAGGGAGTTCAAACGACAAAATCATCTGCCGAAAGAGAAGATTACAGGGAGTCAAAATGCATTGGCCTTCAATTTTAAGCAGTAA 1986 45.62 MPLAAATAAVASGQTVCVTGAGGFIASWLVKLLLQKGYNVRGTVRNPDDSKNAHLKVLDGAKERLTLYAADLLHFESLKAAILGCDGVFHTASPVTDDFEKVDEAIIGTKNVITAAAEAKVQRVVFTSSIGTVHMNPNRSPDIVVDESCWSDLHFCKNTKYLTGSVKTYVNAVQGYVHVKDVAKVHVLVYETPSAFGRYICAETMLHRAELVEILANLFPEYPVPTKCCDEKNPKKKAYKFSVKKVKDLGMAEFIPVKQCIYETVKSLQEKGHLPTQPCQSTTSAVSGHTVCVTGAGGFIASWLVKLLLQKGYTVRGTVRNADDQKNAHLKELEGAKDRLSLFSADLLDFDSLKAAITGCDGVFHTASPVTDDPEKVEQAIIGTKNVMAAAAEAKVRRVVFTSSIGTTIAEQTAWEVAKEQGVDLVVVNPMLVLGPLLQAGVNASVVHIMKYLTGSAKTYVNAVQGYVDVKDVAKAHVLVYETPSASGRYICVESMLHRGELVEILTKFFPEYPIPTKCSDEVNPKKKPYKYTVEKLKSLGMEFTPIKQCIYETVKSLQEKVYIIGCSNSLRQLHAYCFFARELKLHWDHLTKGKKNECYREAPWISRNYRKGVDMWTHLRLAARKLQKGNESKREFKRQNHLPKEKITGSQNALAFNFKQ 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 804454 811214 + Carg04197-RA Car01g00159 141023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00159 661 Pfam NAD(P)H-binding 295 410 IPR016040 -
Car01g00159 661 Pfam NAD(P)H-binding 20 139 IPR016040 -
Car01g00159 661 Coils Coil 319 339 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00159 Car-Chr1:804454 Car14g00957 Car-Chr14:5843170 3.79E-148 dispersed
Car17g00031 Car-Chr17:139900 Car01g00159 Car-Chr1:804454 1.23E-62 transposed
Car18g00944 Car-Chr18:10106464 Car01g00159 Car-Chr1:804454 2.75E-11 transposed
Car01g00159 Car-Chr1:804454 Car14g00956 Car-Chr14:5815604 2.93E-154 wgd
Car01g00159 Car-Chr1:804454 Car17g00848 Car-Chr17:7181299 1.03E-138 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00159 K09753 - csv:116401668 479.559