Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00160 ATGGCTGCTGGAGGGCCTAATTCTGGGCAGCCACAGTTCTTTTCTAGGGCTGGAGATGAGAGTTTTTCGCACGCGCCATTGATCGAGAACACAGAAACTGATCAGATTGTTGTTCCTGATAAAAAAAGCTGGAAAAACCTTTTTGCATACATGGGCCCGGGATTTCTTGTTTCTATTGCTTATATTGATCCTGGGAATTTTGAAACTGATCTACAATCTGGAGCACAGTACAAGTATGAGTTGCTTTGGATCATATTACTGGCTTCTTGCGCCGCCCTCGTCATACAATCTTTAGCAGCAAATCTAGGAGTTGTCACAGGCAATAACTCTGCTGTAGGAAAACATTTAGCAGAGCACTGTAAAGCTGAGTACCCCAAGGTGCAAAATTTCATCCTATGGATCCTTGCTGAAATTGCAATTGTTGCATGTGATATTCCCGAAGTTATAGGAACCGCTTTTGCATTGAATATGCTCTTCAGCATTCCTATTTGGTGCGGGGTTCTTCTGACAGGGCTTAGTACACTACTCCTCCTTGCGCTGCAGCAATATGGGATTAGAAAGCTCGAATTCTTGATTGCATTTCTTGTATTGACAATTGCAATTTGCTTCTTTCTGGAGTTGGGCTACGCACAGCCCGACGTCGGAGAAATTTTTTATGGCTTATTTGTCCCTCAATTAAAAGGAAGTGGTGCTACTGGTCTTGCAATTTCACTTCTTGGTGCTATGGTTATGCCACACAATCTCTTTCTTCACTCTGCACTGGTGCTCTCTAGGAAAATACCCCGATCCATTCCTGGCATCAAGGAAGCTTGCAGATTTTATATGATAGAGAGTGGCTTTGCTCTTTTGGTGGCTTTCTTCATTAACGTGGCCGTCATTTCAGTTAGTGGCGCGGTTTGCAATTCCCCAGATCTAAATAAGGAGGACCAAATGAGCTGCAGTGACTTGGACTTGAATGAAGCTTCATTTTTATTGAGAAATGTATTGGGTAAATGGAGTTCCAAACTTTTTGCCATTGCTTTGTTAGCATCTGGTCAGAGTTCTACCATAACAGGAACCTATGCAGGACAGTATGTCATGCAGGGGTTTCTCGATTTGAAACTGATGCCATGGATCCGAAACTTTTTAACACGAAGCTTAGCGATTGTTCCTAGTTTGATTGTTGCAATCATTGGTGGGCCTTCTGGGGCTGGAAAGTTGATCATTATCTCATCGATGATTTTGTCGTTTGAACTCCCTTTTGCTCTCATTCCCCTTTTGAAGTTTACGAGCAGCCAGACGAAGATGGGTCCACATGTCAACTCCCTTGCGATTACGATACTGACATGGATCATCGGTTTCCTCATCATGGCTATAAATATATACTACCTCATAACCCGTTTCGTCCACATGCTTATTCACAGTGATCTCCAACTCGCAGCAGTCATCTTCATAGGGATACTAGGATTTTCAGGCATGGCATTATATTTAGCTGGAATTGCTTATCTGGTTTTGAGAAAGACCAAGGAGATCACTCATCTCTTGGCCCTAACAACAGAAGAAAGTGAGCGATTGAGCATCGAGCCGAGCAAGACATCAGCATATAACCTCCCGAGCGAAGAAACAGTAAGCATGCAATTGCCTCAGAGAATTAGAACAACCAATGATGTAAACTGA 1656 43.06 MAAGGPNSGQPQFFSRAGDESFSHAPLIENTETDQIVVPDKKSWKNLFAYMGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILLASCAALVIQSLAANLGVVTGNNSAVGKHLAEHCKAEYPKVQNFILWILAEIAIVACDIPEVIGTAFALNMLFSIPIWCGVLLTGLSTLLLLALQQYGIRKLEFLIAFLVLTIAICFFLELGYAQPDVGEIFYGLFVPQLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSIPGIKEACRFYMIESGFALLVAFFINVAVISVSGAVCNSPDLNKEDQMSCSDLDLNEASFLLRNVLGKWSSKLFAIALLASGQSSTITGTYAGQYVMQGFLDLKLMPWIRNFLTRSLAIVPSLIVAIIGGPSGAGKLIIISSMILSFELPFALIPLLKFTSSQTKMGPHVNSLAITILTWIIGFLIMAINIYYLITRFVHMLIHSDLQLAAVIFIGILGFSGMALYLAGIAYLVLRKTKEITHLLALTTEESERLSIEPSKTSAYNLPSEETVSMQLPQRIRTTNDVN 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 809697 815418 - Carg04196-RA Car01g00160 141024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00160 551 Pfam Natural resistance-associated macrophage protein 67 435 IPR001046 GO:0016020|GO:0030001|GO:0046873
Car01g00160 551 Hamap Divalent metal cation transporter MntH [mntH]. 32 461 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00160 Car-Chr1:809697 Car02g00345 Car-Chr2:2494704 8.20E-107 dispersed
Car04g02304 Car-Chr4:18560778 Car01g00160 Car-Chr1:809697 0 transposed
Car01g00160 Car-Chr1:809697 Car14g00955 Car-Chr14:5785491 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00160 K21398 - csv:101209649 949.503