Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00168 ATGGAGAAGAAGACTTATCCGATTGGGGAAGATTCTTATGTTCTGTACGAGGAGGTTGGGCAGGGGGTGAGTGCTTCAGTTCACCGTGCTCTTTGTAAACCTCTTAATGAGATCGTCGCCATCAAGATCCTCGATTTTGAGCGTGAGAATTGTGATCTGGTTAGCATTTATCGTGAAGTACAGACAATGATCTTGGTTGACCACCCAAATGTTCTTAAATCACACTGCTCCTTTGTCAATGGACATAATTTGTGGATTGTTATGCCATACATGTCTGGAGGTTCATGTCTTCACATATTGAAGGCTGCATATCCTGATGGTTTCGAGGAAGTGGTGATAGCAACAATATTACGAGAAGTGTTGAAGGGAGTTGAATATCTTCATAATCATGGACATATACATCGGGATATAAAAGCAGGGAATGTTCTTATTGATTCACGTGGTGCAATCAAGCTAGGGGATTTTGGTGTTTCTGCTTGCCTTTTTGACTCAGGTGATAGGCAACGTGTGAGGAATACATTCGTGGGCACACCATGCTGGATGGCACCTGAAGTTATGGAGCAATTAAATGGTTATGACTTCAAGGCTGACATCTGGTCTTTTGCTATAACTGGGTTAGAGCTTGCCCATGGTCATGCTCCTTTCTCAAAATATCCTCCGATGAAGTCTTTTAAGCAGATGATTGCGAGTTGCTTGGTGAAAGATCCTTCAAAACGACCTTCTGCAAGTAAACTGCTAAAGCATTCATTTTTTAGGCAAGCCCGATCAAGTGATTATATTGCACGTACCCTTTTGGAAGGGCTACCTGTTCTTGGTGATCGTATAAAGGCACTTAAGAGAAAGGAAGAAGATATGCTTGCACAAAAGAAAATGCCAGATGGAAAGAAGGAAGAATTATCTCAGAATGAATATAAACGAGGAATCAGTGGATGGAATTTCAATCTTGATGATTTAAAGGCTCAGGCATCTCTGATTCAGGAATTTGAAGAATCCATAAGTGAAATCAGTGAAGTAGGGAGCTCCAGTAACTTATCTTCTCTTGATGTGCAAGAAAGGAAATTACAATATCAAAATTCTTCAGAACTTTCAGATACTGAAGAGAATGGCATGTTGCGGAGACTACCCTCCATGAAAGCTAATGATTCATTAGATGGTAAAAGATCTATGAATGATTCAACAATTCTTGGTCCTTGCTCCCAACAACATTCTTCGCCTCGCAATGATAATCAAACTGAGAATGGTTCCTGTGAAGAGCTTCCTTTGGAGAACAGCAAAAGAATACTGGGGAGTACTCCTAATTCTAGTCAACATAAAAGAAATGTTTCTTCCAATAACACCGTTCAACAAGAAACCACTTCACCTCTGAACAGAAGAGAGAGTTACGAGTCAGAAAAGAGTGTTGCAAATGGCAGTGTTGCAATTGGAATAACTTCTCAAGCTATAGATGATGTGCTTTCTGATTCTTATTCTAAAGATCCGAAGTCAACATTAGTAAGTCCAGCAACAAATGACGAGGAACAGGATGAGAAAGCAAAGGTACCAGTTATTCAGCAGAAAGGGCGTTTCAAAGTTACCTCGGAGAATGTTGATGTAGACAAGGCAGTTGCACCCCCTCTTCTGCAAAAAAGTCACAGTATGCAGGTTGGTAATTTTGAGGTGATTACCTCAAATTCTGCTACTCCTCTTCTACCTTCTAATCTACCAACTCCTCTACTGACACCTCTACCCTCATCTGATGCTATACCAATTAACACTAGATCTTCTATGTTTCCAGTGTTGCACTCTGTTTTGCAGACAAATATTGTTCAACGGGAGGATATTTTGAATCTAATGAGGCAAATCTCAATCGGAGATTTTCCAGCCGATGGTGTGGCTGATGTCTCATCGGCACAGATAACAACTGAGAAATCTTTGCTTGAGGCAGCTCATGAAAGGGAAAAGGATTTACTCAACGAAGTAACTGAATTACAGTGGAGACCTCTCTTCCTTCTCCTCCTCTTTCACTCTCTGCTTTTCACCCCAACTCTTACACTTCACCATAACTCCTTGCTCTCTGATAAAGCAGCCCTCCTGGCCTTCAGGAACTCCATCATTCTTGATCCCACTTCCGCTCTCGCTAACTGGATCCACCCTGTTCATGTCTGCAACTTCACCGGTGTTGCTTGTGACCGACATCGTCGCCGAGTATCCAAGCTCACTCTCATTGACCTTGGACTTGTGGGAAACATCTCACCCTTCCTCTCCAATCTCACCGGTCTTCGAATTCTGGAAATCGCCAACAATGATCTGTTTGGGGGAATTCCTTCTGAGCTCTTCTCTCTTCAAAATCTTCGTCGTCTTCGCCTCAGTAGCAACGGATTAGAAGGTCCCATACCGAGTTCCTTTGCGAGTTTGTCCAAACTTACTGTCATAAGCCTTATGCTGAACAAGCTAAATGGGACAGTTCCACCCTCTTTCTTTTCTAATTGCACGTCGTTGCATAATGTGGACCTTTCCAACAACTTCCTGACAGGAAGGATTCCAGAAGAAATAGGAAATTGTCCAAATCTGTGGAATCTCAATATTTACAACAACCAGTTCAATGGAGAGCTTCCTCTTTCTTTAACAAACACGTCACTCTATAACTTGGACGTCGAATATAATCATCTTTCAGGCGAACTACCTTCGGCGCTCGTGGAAAACCTGCCTGCAATTAGCTTCCTTCATTTATCAAATAATGATATGGTAAGCCATGGTGGAAATACCAATCTCGAACCATTCATTATGTCGCTTAGAAACTGCAGTAGTTTAGAGGAGCTTGAATTCGCTGGGATGGGGCTTGGAGGGAGGCTGCCTGATTCTATTGGCTATCTGGGAGTCAATTTTTCAGTTTTGTCTTTGCAGGAAAACCAAATATTTGGATCAATCCCTCCAAGTTTGGCGCAGCTTTCCAAACTTGCAGGGCTGAATTTGACATCAAATCTACTTAATGGAACAATTCCAGCAGACATAAGCAAGTTGTCTAAATTGGAGCAGCTGTTCTTATCACATAACCTCTTTACTTCAGGCATTCCAGAAGCATTAGGCGAGTTAGAACATCTTGGTTTGTTGGATCTATCTCACAACCAACTTTCAGGTGAAATCCCAGAAAGTATTGGAAACTTGTCTCAGATGAACTATTTGTTTCTCAACAACAACTTCTTGTCAGGAACAATACCTTCAGCATTGGGAAAGTGCACAGGTCTTTATAAGCTGGACTTATCCTTCAACATGTTGTCAGGAAGCATTCCTCAAGAGATAATAGGCTTGCAAGAGATAAGAATTTTTATTAACCTTTCTCATAACAATCTTCAAGGAATTTTGCCCATTGAGCTTAGCAAGCTGAAAAACGTTCAAGAGATCGACTTTTCGTCCAATAACCTCACCGGAAGCATCTTCCCTCAGATATCAAGTTGTATTGCACTGAGGTTTATAAATTTTTCAATGAATTCCCTCCAAGGTCACCTTCCAGATTCCCTAGGTGAACTTGAGAACCTTGAATCATTTGATATTTCAAAAAACAAAATGTCAGGCATGATTCCAGCCAGTCTTGGTAAGCTCCAATCCCTCACCTATCTGAATCTTTCATTCAATAACTTCGAAGGAATGATTCCAAGAGAGGGTTTTTTCAAATCATCTACACCCTTGTCATTTATGAACAATCCACTACTTTGTGGAACAATTCCTGGAATACGAACCTGTTTTGGCGAGAGAAATCGGTTTCAGTCACCTCTATTCTTGACTATATTCATCTTAATCATATGCATATCATCATTCTTAACAACACTATGCTGTGGGATTGCTTGTCTACGTCTAAAAGCAATTATTTCGATACGAAATAGTGAGTCGTCAAGGAGATCCAAGATGCCAGATTTTACACACAATTTTCCAAGAATAACAAGCAGGCAACTATCAGAAGCCACAGGAGGTTTTGATGAACAGAGACTAATCGGTTCAGGCAGCTATGGACGAGTCTACCGAGGTGTTCTTCCAGATAGAACAACAGTAGCTGTTAAGGTTTTACATACGCAATCTGGAAATTCCACAAAGAGCTTTAACAGAGAATGTGAAGTTTTGAAGCGAATTCGCCACAGAAACCTTATAAGAATAATAACAGCTTGTAGTCTACCAGATTTTAAAGCCCTAGTTCTACCCTACATGGCAAATGGAAGCTTAGATAGGCACCTATATCAACATTCACCAGCCAGCTTGGCTTATGGTTCTTCAGATTTAAGCCTCATCCAGAGGGTAAATATATGCAGTGATATAGCTGAAGGAATGGCATACCTTCACCACCACTCTCCAGTCAGAGTCATACACTGCGATCTAAAGCCGAGCAATGTTCTTCTAAAAGACGACATGACAGCTCTAGTTTCTGACTTCGGAATCTCGAGGCTGATGACTCCTGGAATTGGAAGTGGGGCAGCTGCTGAAAACATGGGAAAGTCAACTGCAAGCATTCTAACTGGATCAATTGGATATATAGCACCAGAATACGGATTTGGTTCATCAGCATCCATGGAAGGAGACGTTTACAGCTTTGGAGTTCTAGTTTTGGAAATGGTGACAAGAAAAAGACCAATAGACGACATGTTCGTTGAAGGGCTGAATCTACATAAGTGGGTGAAGAGTCATTACTACAGCAGAGTAGAAAAGGTAGTGGATTCTTTTCTACAGAGAGATTCGAGAGATCAATCACCTGAAATGAAGAAAATGTGGGAAGTGGCAATCCGAGAGCTAATCGAATTGGGTTTGCTCTGCACTCAACAATCTCCATCCACGAGACCCACAATGCTCGATGCTGCCGATGACTTGAATCGATTGAAGAGATATCTTAATGATGGCGACACCACAACAACATTTGCTTCATCGCTTGGAATTTCTTCCTCCACGCTTGGCGACGACTCCAATTACTCCCCACAAATCGCCATCGACAGAAACATCTAA 4965 41.57 MEKKTYPIGEDSYVLYEEVGQGVSASVHRALCKPLNEIVAIKILDFERENCDLVSIYREVQTMILVDHPNVLKSHCSFVNGHNLWIVMPYMSGGSCLHILKAAYPDGFEEVVIATILREVLKGVEYLHNHGHIHRDIKAGNVLIDSRGAIKLGDFGVSACLFDSGDRQRVRNTFVGTPCWMAPEVMEQLNGYDFKADIWSFAITGLELAHGHAPFSKYPPMKSFKQMIASCLVKDPSKRPSASKLLKHSFFRQARSSDYIARTLLEGLPVLGDRIKALKRKEEDMLAQKKMPDGKKEELSQNEYKRGISGWNFNLDDLKAQASLIQEFEESISEISEVGSSSNLSSLDVQERKLQYQNSSELSDTEENGMLRRLPSMKANDSLDGKRSMNDSTILGPCSQQHSSPRNDNQTENGSCEELPLENSKRILGSTPNSSQHKRNVSSNNTVQQETTSPLNRRESYESEKSVANGSVAIGITSQAIDDVLSDSYSKDPKSTLVSPATNDEEQDEKAKVPVIQQKGRFKVTSENVDVDKAVAPPLLQKSHSMQVGNFEVITSNSATPLLPSNLPTPLLTPLPSSDAIPINTRSSMFPVLHSVLQTNIVQREDILNLMRQISIGDFPADGVADVSSAQITTEKSLLEAAHEREKDLLNEVTELQWRPLFLLLLFHSLLFTPTLTLHHNSLLSDKAALLAFRNSIILDPTSALANWIHPVHVCNFTGVACDRHRRRVSKLTLIDLGLVGNISPFLSNLTGLRILEIANNDLFGGIPSELFSLQNLRRLRLSSNGLEGPIPSSFASLSKLTVISLMLNKLNGTVPPSFFSNCTSLHNVDLSNNFLTGRIPEEIGNCPNLWNLNIYNNQFNGELPLSLTNTSLYNLDVEYNHLSGELPSALVENLPAISFLHLSNNDMVSHGGNTNLEPFIMSLRNCSSLEELEFAGMGLGGRLPDSIGYLGVNFSVLSLQENQIFGSIPPSLAQLSKLAGLNLTSNLLNGTIPADISKLSKLEQLFLSHNLFTSGIPEALGELEHLGLLDLSHNQLSGEIPESIGNLSQMNYLFLNNNFLSGTIPSALGKCTGLYKLDLSFNMLSGSIPQEIIGLQEIRIFINLSHNNLQGILPIELSKLKNVQEIDFSSNNLTGSIFPQISSCIALRFINFSMNSLQGHLPDSLGELENLESFDISKNKMSGMIPASLGKLQSLTYLNLSFNNFEGMIPREGFFKSSTPLSFMNNPLLCGTIPGIRTCFGERNRFQSPLFLTIFILIICISSFLTTLCCGIACLRLKAIISIRNSESSRRSKMPDFTHNFPRITSRQLSEATGGFDEQRLIGSGSYGRVYRGVLPDRTTVAVKVLHTQSGNSTKSFNRECEVLKRIRHRNLIRIITACSLPDFKALVLPYMANGSLDRHLYQHSPASLAYGSSDLSLIQRVNICSDIAEGMAYLHHHSPVRVIHCDLKPSNVLLKDDMTALVSDFGISRLMTPGIGSGAAAENMGKSTASILTGSIGYIAPEYGFGSSASMEGDVYSFGVLVLEMVTRKRPIDDMFVEGLNLHKWVKSHYYSRVEKVVDSFLQRDSRDQSPEMKKMWEVAIRELIELGLLCTQQSPSTRPTMLDAADDLNRLKRYLNDGDTTTTFASSLGISSSTLGDDSNYSPQIAIDRNI 1654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 878041 888968 + Carg04187-RA Car01g00168 141032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00168 1654 MobiDBLite consensus disorder prediction 355 467 - -
Car01g00168 1654 ProSiteProfiles Protein kinase domain profile. 1317 1618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00168 1654 ProSiteProfiles Protein kinase domain profile. 13 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00168 1654 Coils Coil 639 659 - -
Car01g00168 1654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1444 1456 IPR008271 GO:0004672|GO:0006468
Car01g00168 1654 Pfam Leucine rich repeat 957 1012 IPR001611 GO:0005515
Car01g00168 1654 ProSitePatterns Protein kinases ATP-binding region signature. 1323 1345 IPR017441 GO:0005524
Car01g00168 1654 Pfam Protein kinase domain 1318 1607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00168 1654 Pfam Protein kinase domain 13 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00168 1654 MobiDBLite consensus disorder prediction 487 502 - -
Car01g00168 1654 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Car01g00168 1654 MobiDBLite consensus disorder prediction 487 512 - -
Car01g00168 1654 MobiDBLite consensus disorder prediction 426 456 - -
Car01g00168 1654 Pfam Leucine rich repeat N-terminal domain 685 723 IPR013210 -
Car01g00168 1654 MobiDBLite consensus disorder prediction 386 418 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00168 Car-Chr1:878041 Car02g00868 Car-Chr2:6228996 1.25E-10 dispersed
Car15g00143 Car-Chr15:782208 Car01g00168 Car-Chr1:878041 9.91E-08 dispersed
Car01g00168 Car-Chr1:878041 Car14g00948 Car-Chr14:5705162 1.14E-08 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88577 PF00069 Pkinase 7.60E-41 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00168 - - csv:101211325 1647.48