Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00201 ATGGTTTATCACTTCAATAATGTGGTTATCAACTGGCTGCAGCTCTCAAGGACTTATGCCGCTACATCAGGGAAACATGAACAAAAGGTGAAGGTGCCTCTTGCTTTGTTTGGAGGGTCTGGAAACTATGCCTCTGCTTTGTATATAGCTGCAATAAAAGCTAATTCTCTAGACAAGGTGGAGTCTGAGCTTTTTAACCTCGTTGAGGCTATTAAGAAAAGTCCTATATTTGCTCAGTTCACAATGGACCTGTCAGTTCCAGCGGAGACTAGAGTTAAAGCTATCAATGAAATTTCTGCTGAAGCAAAATTTTCAGACGTTGTTGAGAACTTTTTGGTTGTGTTGGCTGAGAATGGGAGGCTGAGATATATAGATAGCATAGCAAAGAGATTTTTGGAGTTGACTATGGCTCATAAGGGAGAAGTTAAAGCAGTTGTCACAACTGTTATTATTGATCCCAGCATACTTGGTGGTCTAATTGTAGAATTCAGCGAGAAAGTATTTGACGTGTCTATTAAAACCCGGGCACGTCAAATGGAGAGGTTCTTGCGCCAACCTGTTACTCTTGATGGCCTCTAG 579 41.28 MVYHFNNVVINWLQLSRTYAATSGKHEQKVKVPLALFGGSGNYASALYIAAIKANSLDKVESELFNLVEAIKKSPIFAQFTMDLSVPAETRVKAINEISAEAKFSDVVENFLVVLAENGRLRYIDSIAKRFLELTMAHKGEVKAVVTTVIIDPSILGGLIVEFSEKVFDVSIKTRARQMERFLRQPVTLDGL 192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1099534 1101635 + Carg07321-RA Car01g00201 141065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00201 192 Pfam ATP synthase delta (OSCP) subunit 41 149 IPR000711 GO:0015986|GO:0046933
Car01g00201 192 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 145 164 IPR020781 GO:0015986|GO:0016020|GO:0046933
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00201 Car17g00909 CCT
Car01g00201 Car14g00911 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00201 Car-Chr1:1099534 Car14g00911 Car-Chr14:5459842 9.66E-105 wgd
Car01g00201 Car-Chr1:1099534 Car17g00909 Car-Chr17:7485374 2.82E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00201 K02137 - tcc:18614630 262.307