Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00230 ATGGCGGCTGCAGCTACAACAAGCGTTGTGCCGCCGAATCGGCGGCGTGCGATTACCGCGCCGGAAGATAAGTTGGAATTCGAGACGACGGAGGGGGATGAATCCGATGAGATGCTGAGCAGAGGGTTTAAAGACCAAATTTATGATGTATATCGATATCTCCCACCAGAGCTTCAGGTTGTCTTGATTTCTGCTACTCTTCCTCATGAAATCCTGGAGATGACGAATAAGTTTATGACAGATCCCGTGAGGATCCTTGTGAAGCGTGATGAGTTAACTTTGGAGGTTGAATGGCTGACTGAGAAGATGCGCAGCAATAACTTCACAGTTTCACATATGCATGGAGACATGCCTCAAAAGGAAAGAGATGCAATTATGGGGGAGTTTCGATCGGGAACTACCCGTGTCCTAATCACTACTGATGTATCACTAGTGATAAACTATGACCTTCCAAACAATCGAGAACTTTACATTCACAGGATAGGAAGGTCTGGTCGGTTTGGGCGCAAGCAAAGCCTGTTCAACTTTTCGGTTGTCATTGTCATGAGCTAA 552 46.38 MAAAATTSVVPPNRRRAITAPEDKLEFETTEGDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTNKFMTDPVRILVKRDELTLEVEWLTEKMRSNNFTVSHMHGDMPQKERDAIMGEFRSGTTRVLITTDVSLVINYDLPNNRELYIHRIGRSGRFGRKQSLFNFSVVIVMS 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1255220 1260126 + Carg07350-RA Car01g00230 141094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00230 183 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 70 183 IPR001650 -
Car01g00230 183 Pfam Helicase conserved C-terminal domain 88 168 IPR001650 -
Car01g00230 183 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 33 85 IPR014001 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00230 Car-Chr1:1255220 Car14g01103 Car-Chr14:9783385 1.65E-57 dispersed
Car01g00230 Car-Chr1:1255220 Car14g00879 Car-Chr14:5219907 5.46E-14 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00230 K13025 - csv:101222664 254.988