Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00231 ATGTCTCGCCAAGTTCCGATCACTGCGTTCCACAAGTCCAAGACGCTTGATAACAAATATATGCTGGGAGATGAGATCGGGAAAGGAGCATATGGGCGAGTTTACAAAGGTCTGGATTTGGAGAATGGGGATTTTGTTGCTATTAAACAAGTTTCCTTGGAGAATATTGCTCAAGAGGACCTCAACGTTATCATGCAAGAGATTGACTTACTGAAGAATTTGAACCACAAAAACATTGTGAAGTATCTTGGATCTCTGAAAACGAAGTCTCACCTTCACATAATACTCGAGTATGTGGAAAATGGATCATTTGCCAACATTATCAAGCCAAATAAATTTGGACCTTTTCCAGAATCATTGGTTGCACTTTATATTTCTCAGGTTTTGGAAGGCTTGGTTTATCTACATGAGCAGGGTGTAATTCATCGCGATATAAAGGGTGCGAACATTCTGACTACCAAAGAGGGTCTTGTGAAACTTGCTGATTTTGGTGTTGCGACAAAATTAACAGAGGCTGATGTTAATACGCATTCAGTTGTTGGAACACCTTACTGGATGGCTCCTGAGGTAATCGAAATGTCAGGAGTTTGTGCTGCTTCCGACATTTGGAGTGTTGGATGTACTGTGATTGAACTGCTTACATGCGTACCTCCATACTATGATCTGCAACCTATGCCCGCTCTTTTTCGCATTGTTCAGGACAAGCATCCTCCAATTCCGGATAGCCTATCACCAGACATCACTGATTTTTTACGCCAGTGCTTTAAGAAGGATGCTAGGCAAAGGCCTGATGCGAAAACTTTGCTTTCTCATCCTTGGGTACAGAATTGCCGACGGGCTTTGCATTCTTCTCTTCGTCATAGCGGCACATTGAGAAACACTCAACTAGATGGATCACCAGGAGAAGAAATTTCTAATGGAGACGATCAAAACTCTTGTGAAAGTCCTTCAGCGGAGAAAAATGAAATTGCTGGTTCTGATTTTAAAGCTGATTCAAGGAAGGAGTTGGCATCAGATGTTGCCACTGATACGAGCAATTCCCAAAAACATTTTGCTTCAGGCCCTAATTTTGATGAGGAAGGAGAAGCCATAGAAGAAGATACTCTATTGGATCAAGTTCCAACCTTATCCATTCGTGATAATTTATCTCTTCTAACTGGTTCAGGCAGACTTGCAACCTCTGAGCCGACTGAGTTTCATGAATCTCATGGTAGAGCCCATGATGAAGTGATAATGAATGGAGGAGTGCCATCGGCAGAACTAAGAAAAGTTGCGTCTAGGAAACATGGAGAGAAAGAAACTTCTACAACATCTGGAAATAGCTCGTTTGGTTTTGGACCTGAAGGTCATGATAATTGTTTTCAAAAGGCTTCGAAGATGTCAATTGCTTCGGGAGGAAATGAGCTGAGTAAATTTAGCGACACTCCTGGAGATGCTTCCTTAGATGATTTATTTCAACCTTTAGATAAGCTCCCCGCTGATCGATCTTCTGAAGCATCAACATCACTATCTACCCCACAATCAAATATAGGTAATGTGCCAGTAAATAATGTCGGGAAAAATGACCTAGCCACAAAGTTGAGGGCTACGATTGCTCAGAAACAAATGGAAAATGAAATGGGACAAGTAAATGGTGGCGATGACCTGCTTCGACTAGTGATGGGTGTTTTAAATGATGATGTTGATATTGATGGTTTGGTTTTTGATGAGAAGTTGCCCGGAGAAAACCTTTATCCTTTGCCGGCTGTTGAATTCGGCAGATTAGTTGGGTCATTGAGACCTGATGAACCTGAAGACGTAATTGTATCTGCCTGTCACAAATTGATTGCCATCTTCCATCATAGACCTGAGCAGAAAATTGTTTATGTTACACAGCATGGTCTACTCCCATTGACGGAGTTGCTTGAAGTTCCTAAAACTCGTATTACATGTTCAGTGCTCCAGCTTATAAATCAGATAGTTAAGGATAACGATGACTTCCAAGAAAATGCTTGTCTTGTTGGTCTAATTCCTCTGGTAATGGGATTTGCGGTTCCTGACCGGCCCCGAGAAGTTCGTATGGAAGCAGCTTATTTCTTTCAGCAGCTTTGTCAATCAAGCTCTTTGACATTGCAAATGTTCGTTGCATGCCGTGGAATACCTGTATTAGTAAGCTTTTTAGAGGCTGATTATGCAAAGTACAGGGAAATGGTTCACCTAGCTATTGATGGAATGTGGCAGATCTTTAAGCTCCAGCGTTCCACTCTTCGAAATAGTTTCTGTCGTATATCAGCAAAAAGTGGAATTCTGCTTAGGCTTATTAACACCCTCTACAGCTTAAATGAGGCAACTCGCTTAGCTTCTATAACGGTGGGGGCTGGAAATCCATTTGATGGTTTTCAACGGTCACGATCAGGTCAACTAGATTCTAGCCACTGTATATTCAGTCAGTATGAGGCCCCATTTCCTGTGCCTGATCAGCCTGATCTTTTGAAGGTCAGGCATGGAATAGTTGATCATCACCTGTCTGCTGGAACCCCAGAACCTTCAAGGGCTTCATCTTCACATTCTCAAAGATCAGATGCGAATCAATCTGATCACCGACACTTTTCCACAGATCCTGGTAGGCTGTCTAGCAATGCCACAAATGAAGCGTTGGGGACTTCTAAACCACCGGAGCTAGCATCTTTAGAAAAAGTTGTAAATTTAGCAACCAAAGAACCGTCGGGCTTTGTTTCTAAAGAACATGAAAATGTAGATAGATGGAGAATTGAGCAGATGGTCAATTCAAACAGGACTTCCACAGATAGACCTCCAAAATTTCTGGAACCTGCATCTAATGGATTTCCTACAGCCTCGATGGTTACGCCGCAAGAGCAAGTTCGGCCCCTTCTAAGTCTATTGGACAAAGAACCCCCTTCTCGACACTTGTCTGGTCAGCTTGAGTACATGCACCACCTTTCTGGATTGGAGAGACATGAAACTATAATGCCTCTATTGCATGCATCGAATGAAAAGAAGATGAATGGGGAGCTTGATTTCTTAATGGCAGAATTCGCTGAGGTTTCTCAACGTGGAAAAGAAAATGGAAATCTTGACCCCACTTCTAAGGTTTCCCTTAAAACGGTGGGAAAGAAGGTAGAACCCCTGGTGTCCAATGAGGGAGCTCCATCCACTTCTGGAATTGCTTCACAGACAGCATCTGGGGTGCTTTCAGGTTCGGGTGTATTAAATGCTATACCGGGGAGTTCAACATCCTCTGGACTTCTCTCGCACATGGTTTCAACTATGAACGCTGATGTTGCAAGGGAATACCTAGCGAAGGTGTCTGATCTTCTGCTTGAGTTTGCTCAGGCAGATACAACTGTGAAGTCATATATGTGCAGCCATAGCTTGCTCAATCGCCTTTTCCAGATGTTCAATAGGGTAGAGCCCTCAATTCTCTTGAAGATATTGAAGTGTATAAATCATCTATCAACAGATCCAAACTGCTTAGAAAATCTTCAGCGAGCAGATGCAATTAAATATTTGATTCCAAACCTTGAACTCAAAGAAGGGTCTCTAGTATCGCAAATACATACTGAGGTCCTCAGCACACTATTCAATTTGTGCAAGATAAATAAGAGGAGGCAAGAATGTGCAATTGAAAATGGAATTATTCCACACTTGATGCATTTTATTATGTCAGACTCTCCTCTTAAAAAAGATGCATTGCCTCTACTGTGCGATATGGCCCATGCATCTCGTAATTCTAGGGAGCAGTTAAGAGCCCACGGTGGCTTAGATGTATATTTAAGCCTACTTGAGGATGAGATTTGGTCTGTCACGGCATTGGACTCCATTGCTGTGTGCTTAGCTCATGACAATGACAACCGAAAAGTTGAACAGGCTTTGCTGAAAAAGGAAGCAATTAAAAAATTGGTGAAGTTTTTCCAGTGCTGTCCGGAACAACATTTTGTGCATATATTGGAGCCGTTCTTGAAAATCATCACAAAATCTTCCCGAATCAATACAACACTGGCTGTCAATGGATTGACCCCATTGCTTATAGCAAGGCTGGACCATCAGGATGCGATTGCTCGGCTTAATCTACTTAAACTGATCAAGGCTGTGTATGAGCATCATCCACGACCAAAGCAATTGATTGTGGAAAATGATTTACCTCATAAACTTCAGAATTTGATTGAGGAACGCAGAGATGGACAACGGTCTGGTGGTCAGGTATTGGTGAAACAAATGGCCACATCTCTGCTAAAAGCACTTCACATCAATACAGTTTTGTAA 4263 42.22 MSRQVPITAFHKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNVIMQEIDLLKNLNHKNIVKYLGSLKTKSHLHIILEYVENGSFANIIKPNKFGPFPESLVALYISQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDKHPPIPDSLSPDITDFLRQCFKKDARQRPDAKTLLSHPWVQNCRRALHSSLRHSGTLRNTQLDGSPGEEISNGDDQNSCESPSAEKNEIAGSDFKADSRKELASDVATDTSNSQKHFASGPNFDEEGEAIEEDTLLDQVPTLSIRDNLSLLTGSGRLATSEPTEFHESHGRAHDEVIMNGGVPSAELRKVASRKHGEKETSTTSGNSSFGFGPEGHDNCFQKASKMSIASGGNELSKFSDTPGDASLDDLFQPLDKLPADRSSEASTSLSTPQSNIGNVPVNNVGKNDLATKLRATIAQKQMENEMGQVNGGDDLLRLVMGVLNDDVDIDGLVFDEKLPGENLYPLPAVEFGRLVGSLRPDEPEDVIVSACHKLIAIFHHRPEQKIVYVTQHGLLPLTELLEVPKTRITCSVLQLINQIVKDNDDFQENACLVGLIPLVMGFAVPDRPREVRMEAAYFFQQLCQSSSLTLQMFVACRGIPVLVSFLEADYAKYREMVHLAIDGMWQIFKLQRSTLRNSFCRISAKSGILLRLINTLYSLNEATRLASITVGAGNPFDGFQRSRSGQLDSSHCIFSQYEAPFPVPDQPDLLKVRHGIVDHHLSAGTPEPSRASSSHSQRSDANQSDHRHFSTDPGRLSSNATNEALGTSKPPELASLEKVVNLATKEPSGFVSKEHENVDRWRIEQMVNSNRTSTDRPPKFLEPASNGFPTASMVTPQEQVRPLLSLLDKEPPSRHLSGQLEYMHHLSGLERHETIMPLLHASNEKKMNGELDFLMAEFAEVSQRGKENGNLDPTSKVSLKTVGKKVEPLVSNEGAPSTSGIASQTASGVLSGSGVLNAIPGSSTSSGLLSHMVSTMNADVAREYLAKVSDLLLEFAQADTTVKSYMCSHSLLNRLFQMFNRVEPSILLKILKCINHLSTDPNCLENLQRADAIKYLIPNLELKEGSLVSQIHTEVLSTLFNLCKINKRRQECAIENGIIPHLMHFIMSDSPLKKDALPLLCDMAHASRNSREQLRAHGGLDVYLSLLEDEIWSVTALDSIAVCLAHDNDNRKVEQALLKKEAIKKLVKFFQCCPEQHFVHILEPFLKIITKSSRINTTLAVNGLTPLLIARLDHQDAIARLNLLKLIKAVYEHHPRPKQLIVENDLPHKLQNLIEERRDGQRSGGQVLVKQMATSLLKALHINTVL 1420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1259071 1275261 - Carg07351-RA Car01g00231 141095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00231 1420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Car01g00231 1420 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00231 1420 MobiDBLite consensus disorder prediction 493 517 - -
Car01g00231 1420 MobiDBLite consensus disorder prediction 423 449 - -
Car01g00231 1420 MobiDBLite consensus disorder prediction 867 882 - -
Car01g00231 1420 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00231 1420 MobiDBLite consensus disorder prediction 324 338 - -
Car01g00231 1420 MobiDBLite consensus disorder prediction 288 358 - -
Car01g00231 1420 MobiDBLite consensus disorder prediction 834 886 - -
Car01g00231 1420 MobiDBLite consensus disorder prediction 495 517 - -
Car01g00231 1420 MobiDBLite consensus disorder prediction 339 353 - -
Car01g00231 1420 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Car01g00231 1420 MobiDBLite consensus disorder prediction 288 319 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00231 Car-Chr1:1259071 Car17g00232 Car-Chr17:1433358 2.54E-73 dispersed
Car10g00320 Car-Chr10:1574533 Car01g00231 Car-Chr1:1259071 7.28E-25 dispersed
Car18g01016 Car-Chr18:10579415 Car01g00231 Car-Chr1:1259071 3.42E-55 dispersed
Car14g01481 Car-Chr14:12284845 Car01g00231 Car-Chr1:1259071 1.68E-35 transposed
Car01g00231 Car-Chr1:1259071 Car14g00878 Car-Chr14:5195838 5.61E-127 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88580 PF00069 Pkinase 2.50E-72 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00231 - - csv:101206469 2501.47