Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00255 ATGTCGGTGCCTGCGGCTTCCGTCGCTGCAGGTATATTGAAACAGGTTGCTTGCTCGTTTCCAAAACAGTTCATTTTATTGTGGTTTCTGATTCCCGTCACCAATGCCTATGTACCCGATATATCAGCAGCACCTTTGGTTGCACCTGCTATCCACGATATGCCTTTTCCTGCCAAATTGCCTCCTCACCAACGCCACCGTGGAAAAAATATGTCACCGCAGAGTGTGTCAGCAGCTGGACTAGCACCAGCATCTCCTCCTTACTATGGGCCTCTTATCATTTCTGGTCACTCACCCACGAGTTCAAGTTTTTCAAAACCATTGATGAAGAGTGGATCGGCTCCTCCTGATGGTAGGCTTGAAAACATTGCTCCCATACAGTCCAGTGCTGGTGCTATTCCCCTTGGATTACCACAGCCACCACTTTCTCCTAATGCAGCAGACTGTTGCAAACCTGACATGGTGCTGAAACGAGGAAGTGGCAATGACTGCCACTGTGTCTATCCCATAAAAATTGATCTCCTCCTCTTGAATGTATCACAGACTCCTAATTGGAAACTTTTTCTCGAAGAGTTAGCTTCCGAACTAGGTTTACGAGTCTCTCAGATTGAGCTGATAAACTTTTATGTAATTAGTTTATCAAGGTTAAATATCTCAATGGACATCACTCCACATGCTGGGATCAGCTTTTCTGCGGTTGATGCATCGTCGATAAACTCTTCACTTACAATGCACAAGGTTCATCTAGACCCTACACTGGTTGGTGATTACAATCTTCTCAATCTCACCTGGTTTAAGCCTCCTCCTCCTTCTCAAGCTCCTACAGCTTCGGCATCACCTGTAGCAGCTCCTGTATATCATTTTCCAGCCTCAACATCACTGAGTCCTCCTAGTAAAGGACACCATTCAAATCTGACCCTTATTCTTGGGATCGGTGCTGGCTTTTTTTTCATTGCCATTCTATTTGTGTTGATAATTTGTCTATACACATCTCGTCGTGGGAAGACTGAAGCACCTCCTTTAGTAGCTGAAAAACCAAGGGTTGAAGACAAAGTGCCTGGGGTAGGATCTTTCCCTCATCCATCAAGTATGAGGTTTCTAACTTACGAGGAGCTTAAAGAAGCAACTAATAACTTCCAAGCAGAAAGCATATTGGGGGAGGGTGGTTTTGGCAGGGTTTTTAAGGGTGTCTTAAGTGACGGCACAGCTGTTGCAATCAAGAGGCTTACAAGTGGAGGGCAACAAGGTGATAAGGAGTTTTTGGTTGAGGTCGAGATGCTTAGTCGGTTGCATCATCGAAATCTTGTTAAACTTGTTGGCTACTACAGTAATCGTGATTCTTCACAGAACCTGCTATGCTATGAACTTGTTCCCAATGGAAGCTTGGAGGCCTGGCTCCATGGGCCTCTAGGTGTTAATTGTCCTTTGGATTGGGACACCAGAATGAAGATCGCGCTTGATGCAGCTCGAGGACTTGCTTACCTTCATGAAGACTCGCAACCGTGTGTTATCCACAGAGACTTTAAGGCATCAAATATACTGCTTGAGAACAACTTCCATGCCAAAGTTGCTGACTTTGGTCTTGCTAAACAAGCTCCGGAAGGCAGAGCTAATTACCTTTCTACTCGTGTGATGGGTACATTTGGGTATGTCGCCCCCGAATATGCAATGACTGGTCATTTACTCGTTAAAAGTGATGTTTATAGCTATGGAGTTGTTCTTCTTGAGTTGCTCACCGGAAGAAAACCTGTCGATATGTCACAAACATCAGGGCAGGAGAACCTTGTCACATGGGCGAGGCCAATTTTGAGAGATAAGGATCGGTTGGAAGAACTTGCTGATCCACGACTCGGAGGAAAGTATCCGATGGAAGATTTCGTGCGGGTGTGTACCATTGCTGCAGCCTGTGTCGCTTCAGAGGCTGGCCAACGCCCAACTATGGGCGAAGTTGTACAGTCTCTTAAAATGGTCCAGCGGACTACAGAATACCAAGACACCATGGTACCATCCTCCAACAACCAAACCAATGTCAAACAATTCTCCACAACATTCGAGTCCGATGGATCCTCGTCGATGTTCTCTTCTGGTCCTTATTCTGGTTTATGCGCTTTTGACAATGACAATGTATCTCGGACAGCAATTTTCTCCGAAGATCTCCACGAGGGACGATGA 2172 45.72 MSVPAASVAAGILKQVACSFPKQFILLWFLIPVTNAYVPDISAAPLVAPAIHDMPFPAKLPPHQRHRGKNMSPQSVSAAGLAPASPPYYGPLIISGHSPTSSSFSKPLMKSGSAPPDGRLENIAPIQSSAGAIPLGLPQPPLSPNAADCCKPDMVLKRGSGNDCHCVYPIKIDLLLLNVSQTPNWKLFLEELASELGLRVSQIELINFYVISLSRLNISMDITPHAGISFSAVDASSINSSLTMHKVHLDPTLVGDYNLLNLTWFKPPPPSQAPTASASPVAAPVYHFPASTSLSPPSKGHHSNLTLILGIGAGFFFIAILFVLIICLYTSRRGKTEAPPLVAEKPRVEDKVPGVGSFPHPSSMRFLTYEELKEATNNFQAESILGEGGFGRVFKGVLSDGTAVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYYSNRDSSQNLLCYELVPNGSLEAWLHGPLGVNCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQTSGQENLVTWARPILRDKDRLEELADPRLGGKYPMEDFVRVCTIAAACVASEAGQRPTMGEVVQSLKMVQRTTEYQDTMVPSSNNQTNVKQFSTTFESDGSSSMFSSGPYSGLCAFDNDNVSRTAIFSEDLHEGR 723
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1418880 1424007 + Carg07375-RA Car01g00255 141119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00255 723 ProSiteProfiles Protein kinase domain profile. 379 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00255 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 503 515 IPR008271 GO:0004672|GO:0006468
Car01g00255 723 Pfam Protein kinase domain 380 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00255 723 ProSitePatterns Protein kinases ATP-binding region signature. 385 407 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00255 Car14g00853 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00255 Car-Chr1:1418880 Car10g00648 Car-Chr10:3304194 5.27E-124 dispersed
Car01g00255 Car-Chr1:1418880 Car14g00853 Car-Chr14:5024085 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88582 PF00069 Pkinase 2.50E-44 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00255 - - csv:101219278 1224.92