Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00304 ATGCCCTTGGAAGGGGTTTTTATTGAACCTTCTTCAACCCCACTTCCTGATCTCTCTCTTCAAATCAGCCCTCCAAATGCTTCTTCTTCTTCCTCCTCCTCCTCCTCTAATTCTTCTTCAATTAAAACCCTCACCCATGGATTCCCTCAAACAAATTTTGATCTTTTGAGTAATTCCGATAACCCTCGTGCCCACACCGACCTCTCTCTCGGTACCAACAACGATCTTCCCGGCCGTGCACCGCTACCCCCGCCGCTCCACCATCTTCGCGGGGTTTCGGGGTTCGACGTATCGGACCGGTTGCGACCATCAAAGGGATTCCCGTGTACCACAACCGCCCATCAGAAAGATCATCGTTATCATCATCATCATCCTCATCAGAACCACCATCAATTTTCATCCTTCTACCCGAATTACCCGAACCCGAATGGAGTTCTTCAAACGGGTTATCGAAATTCCGCTGCGAGGTTCAACAATGGGACGGTTTCGGTTGAAGGAATTAAATCCTTGCATAGTAATAGTAATGCAGCTTCTTCTTCTTCTGATGTTTGTTCTCATGGAATGATGATGAGATCCAGATTCTTGCAGAAGCTTCCTCCTAAAAGAAGCATGAGAGCTCCTAGAATGAGATGGACTACCTCCTTACATGCTCGTTTCGTTCACGCCGTCGAACATCTCGGCGGCCACGAAAGTAAACAACAAACCCTTTTTCTCTTCCGATCTCTGTCTCTAATATTCGAGTACTTTTTTATTTTGATTCATTCCTATCGAGCAACTCCAAAGTCAGTTCTTGAGCTGATGGATGTTAAGGATCTAACATTGGCTCATGTCAAGAGCCATTTACAGATGTATCGGACTGTTAAGACCACTGACAAGCCAGCAGCTTCCTCAGGCCAATCAGACGGTTCGGGTGACGATGACGTATCTCCTACAATATGCACGGGCCGAGGGGACAATGCCCCAAGGCAATTTTCCGATCAAAGAGCTCCATCGGAGCGGTCCAGCCAGCCACTGCCGGATTTGGAATTTGGCTCCTCCACTCTTTGGTCTAATTCTTCAAGAGATGTATGGCCACAAACAAACTCTAATGAAACGGATATGATTAGATCAAATTCATCTACCCAACCCATGCATCAAATCGAGGAATGTGATTCAGGTGCAATGAAGAGATACAATAATTCAGAGTGCAAGAAGCCAAGCTTGGAATTCAGGTTAGGCAGAGCAGAATGGGATCTCAAAGAAGACTAA 1248 46.23 MPLEGVFIEPSSTPLPDLSLQISPPNASSSSSSSSSNSSSIKTLTHGFPQTNFDLLSNSDNPRAHTDLSLGTNNDLPGRAPLPPPLHHLRGVSGFDVSDRLRPSKGFPCTTTAHQKDHRYHHHHPHQNHHQFSSFYPNYPNPNGVLQTGYRNSAARFNNGTVSVEGIKSLHSNSNAASSSSDVCSHGMMMRSRFLQKLPPKRSMRAPRMRWTTSLHARFVHAVEHLGGHESKQQTLFLFRSLSLIFEYFFILIHSYRATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGQSDGSGDDDVSPTICTGRGDNAPRQFSDQRAPSERSSQPLPDLEFGSSTLWSNSSRDVWPQTNSNETDMIRSNSSTQPMHQIEECDSGAMKRYNNSECKKPSLEFRLGRAEWDLKED 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1695691 1699065 - Carg07424-RA Car01g00304 141168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00304 415 MobiDBLite consensus disorder prediction 288 307 - -
Car01g00304 415 MobiDBLite consensus disorder prediction 288 377 - -
Car01g00304 415 MobiDBLite consensus disorder prediction 14 73 - -
Car01g00304 415 MobiDBLite consensus disorder prediction 1 76 - -
Car01g00304 415 MobiDBLite consensus disorder prediction 316 377 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00304 Car-Chr1:1695691 Car19g00172 Car-Chr19:1554049 1.35E-46 dispersed
Car14g00797 Car-Chr14:4656622 Car01g00304 Car-Chr1:1695691 8.27E-16 transposed
Car01g00304 Car-Chr1:1695691 Car14g00796 Car-Chr14:4653402 1.82E-82 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2789 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00304 - - cmax:111492942 643.269