Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00330 ATGGAGAATTGGATGGGTCTACTTAGAATTCATGTGTGTAGAGGAATCAATCTTGCTATAAGAGATGTTTATAGCAGTGATCCTTATGTTATTTTGAAGATGGGCGATCTGAAGTTGAAGACTCGAGCTGTGAAGCAAAATACTAACCCGCAGTGGAACGAAGATCTAACTCTATCAATCGAAGATCCAAATCTTCCGATCACCATGTTTGTATACGATAAGGACCGGTTCTCACTAGATGATAAGATGGGCGATGCGGAGATCGATGCTCGTCCGTTCGTGGAAGTTGTTAAGATGAAACTAAACAACCTTCCGAGTGGAACCATCGTAAGAACGATTCAACCAAGTAAGAGCAATTGTTTGTCGGAAGAAAGTTACATCGTTTGGGAAAATGGAGAAGTTACTCAAAAAATGTTTGTAAGGCTAAGAAATGTGGAGTGTGGGGAAGTTGAGCTGCAATTGAAATGGATTGGTATTCCTGGTTCTACACGGTTACAGACCTAA 504 40.87 MENWMGLLRIHVCRGINLAIRDVYSSDPYVILKMGDLKLKTRAVKQNTNPQWNEDLTLSIEDPNLPITMFVYDKDRFSLDDKMGDAEIDARPFVEVVKMKLNNLPSGTIVRTIQPSKSNCLSEESYIVWENGEVTQKMFVRLRNVECGEVELQLKWIGIPGSTRLQT 167
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1878426 1879123 - Carg07450-RA Car01g00330 141194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00330 167 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
Car01g00330 167 Pfam C2 domain 6 92 IPR000008 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00330 Car-Chr1:1878426 Car10g00310 Car-Chr10:1521794 1.33E-75 dispersed
Car01g00330 Car-Chr1:1878426 Car14g00769 Car-Chr14:4397737 6.61E-93 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00330 - - csv:101218477 265.388