Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00341 ATGAAGCGAGATCACTCTTACCAGTCACCAAATCCCACCGCCGGCAAGGCCAAGATATGGCCGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACGAGCTCCTAGCAGCTCTAGGCTACAATGTCCGGTTGTCGGACATGGCCGACGTCGCTCTGAAACTCGAACAGCTCGAAATGGTAATGGGTTTGTCGGAAGAAGACGGAATTTCTCATCTCTCTTCCAACACCGTCCATTACAATCCCTCCGATGTGTCTTCTTGGGTTCAAAGCATGCTCGCTGAACTCAACACCGATGACTCTGTTTTCGCCGAAGCCGAATCAACCTCCGCCGTCGCGGCATTCGCCGACGACTCTGAGTACGATCTCCGAGCAATTCCGGGCGTTGCTGTTTTCCCCCAAATCGATTCCAATACACCCAGAAAGCGATTTAAGAAATCAGAGTCCGAATCGGTTCTTGTTACTGCTGCTTCTTCTTCTTCGTCGTCGTCAGAGCCGTCGCGCACGGTGGTTCTGGCGGATTCCACCGACGCTGGCGTCTATCTAGTCCATACCCTCCTCGCCTGCGCCGAGGCCGTCGATATCAACAACCTCAACCTCGCCGATACATTACTGAAACACATCAGAATCCTCGTCGAGGCCCAAGGCGGCGCGATGAGGAAAGTCGCCGGTTATTTTGCACAAGCCCTTAATCACCACATTTACGGATTGCACCCACAAAAGCCCTTCGAATATGCATCTTCATACACCGATCTTCTCCAAATGAATTTCTACGTGTCTTGCCCGTATATGAAATTCGCCCATTTCACGGCCAATCAAGCGATTCTCGAATCTGTTGGCACCGCCGCAACCGTCCACCCTTCAGCAAGGCCCCAATGGCCGGCGTTGATTCAAGCCCTCGCGCTCCGTCCCGGAGGGCCGCCGGCGTTTTATCTCACCGGAATCGGGCCCCCGCCGGGGGAAAATTCCACCGACGGATTACAGGAAGTGGGTTTGAAATTGGCTCAATTTGCGGATACGATCGGTGTGGAATTCGAATTCCGTGGGTATTTCTGCAACGATTTAGCCGAGCTCGATCCGTCCATACTCAATTTAGAATCAGAAACGGTCATCGTGAACTCTGTTTTCGAGCTCCATCGGCTACTGGCGCATCCGGGCGCGATCGAGAAAGTTCTAAGAACAATCAAAGAACTTAACCCCAAAATCGTCACCGTCGTGGAGCAGGTCGCTGACCACAACGGACCATCGTTCACCGGCCGATTCACAGAAGCGTTACACTATTACTCGAGCTTGTTCGATTCGTTGGAAGGGTCGCTGGCAGGGTCGGAGGATGTGGCAGGGTCGGAGGAGTATTTGGGGAGGCAAATCTTGAACGTGGTGGCGGGTGAAGGTTCCGACCGTGTCGAGCGGCACGAGACATTGGCGCAGTGGCAGAGCCGGTTGGGTTCGAGTGGGTTCGAGATGGTTCATTTGGGTTCAAACGCGTTCAAGCAGGCGAGTACTCTGTTGGCTCTGTTCGGCGGCGGAAATGGTTATAGAGTTGAAGAGAATAATGGAAGTTTGACGTTGGGTTGGCACACTCGGCCGCTTATCGCCACCTCGGCGTGGGCTGTGGCCTCCTGTACCGGCGGCGAGTCAATCTGA 1638 54.27 MKRDHSYQSPNPTAGKAKIWPEEEEEEEEEDELLAALGYNVRLSDMADVALKLEQLEMVMGLSEEDGISHLSSNTVHYNPSDVSSWVQSMLAELNTDDSVFAEAESTSAVAAFADDSEYDLRAIPGVAVFPQIDSNTPRKRFKKSESESVLVTAASSSSSSSEPSRTVVLADSTDAGVYLVHTLLACAEAVDINNLNLADTLLKHIRILVEAQGGAMRKVAGYFAQALNHHIYGLHPQKPFEYASSYTDLLQMNFYVSCPYMKFAHFTANQAILESVGTAATVHPSARPQWPALIQALALRPGGPPAFYLTGIGPPPGENSTDGLQEVGLKLAQFADTIGVEFEFRGYFCNDLAELDPSILNLESETVIVNSVFELHRLLAHPGAIEKVLRTIKELNPKIVTVVEQVADHNGPSFTGRFTEALHYYSSLFDSLEGSLAGSEDVAGSEEYLGRQILNVVAGEGSDRVERHETLAQWQSRLGSSGFEMVHLGSNAFKQASTLLALFGGGNGYRVEENNGSLTLGWHTRPLIATSAWAVASCTGGESI 545
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 1967163 1968814 + Carg07461-RA Car01g00341 141205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00341 545 Pfam Transcriptional regulator DELLA protein N terminal 31 97 IPR021914 -
Car01g00341 545 ProSiteProfiles GRAS family profile. 171 535 IPR005202 -
Car01g00341 545 MobiDBLite consensus disorder prediction 1 30 - -
Car01g00341 545 Pfam GRAS domain family 180 534 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00341 Car-Chr1:1967163 Car15g00691 Car-Chr15:3844754 0 dispersed
Car01g00341 Car-Chr1:1967163 Car14g00752 Car-Chr14:4205537 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2790 PF03514 GRAS 2.60E-109 CL0063 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00341 K14494 - csv:101203095 799.275