Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00361 ATGGTTCAGCCGACAAATCCATCCAAATTGCGATGGGGGGAGCTAGATGACGATGATGGGGATCTCGATTTTCTTCTTCCTCCCAAGCAAGTTATTGGGCCGGACGAAAATGGGTTGAAGAAAACTATCGAGTATCAGTTTAACGAAGATGGAAACAAGGTCAAAATCACGACGACCTCTCGAACGCGCAAGCTTGCTAATGCTCGTCTGAGTAAACATGCCATAGAGCGCCGATCTTGGGCCAAGTTCGGCGATGCTGTTCATGAAGACGTCGGAAGTAGGCTCACTATGGTCTCCACCGAGGAGATTCTTCTTGAGCGCCCTCGTGCTCCTGGTAGCAAACCAGAGGAGCCAAAGGTTGCTGGAGACCCTCTAGCTCAACTTGGGAAAGGTGGAGCTGTTCTTATGGTCTGCCGAACCTGTGGTAAAAAGGGTGACCACTGGACCTCAAGGTGCCCTTACAAAGACCTGGCATCACAAGCTGATGGATTGGATAAGACTGTTGCACCAGAGGCTACAGCTGCCGCTCCTGGTGCAACGAAGGGAGCGTATGTACCTCCAGGTATGAGAGCAGGGGCAGAGAGGACTGGAACTGACATGAGACGTAGAAATGATGAAAACTCTGTTCGTGTGACCAACCTTTCGGAGGATACTAGAGAGCCTGACTTACTTGAGCTTTTCCGACCTTTTGGTGCTGTTAGCCGAGTTTATGTCGCTGTTGATCAAAAGACTGGCATGAGCAGAGGATTTGGTTTTGTGAACTTTGTGAACCGTGAGGATGCACAAAGAGCAATTAACAAACTCAATGGATATGGTTATGATAATCTCATCCTTAGAGTTGAGTGGGCTACTCCAAGGGCGACTTAA 867 49.02 MVQPTNPSKLRWGELDDDDGDLDFLLPPKQVIGPDENGLKKTIEYQFNEDGNKVKITTTSRTRKLANARLSKHAIERRSWAKFGDAVHEDVGSRLTMVSTEEILLERPRAPGSKPEEPKVAGDPLAQLGKGGAVLMVCRTCGKKGDHWTSRCPYKDLASQADGLDKTVAPEATAAAPGATKGAYVPPGMRAGAERTGTDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGAVSRVYVAVDQKTGMSRGFGFVNFVNREDAQRAINKLNGYGYDNLILRVEWATPRAT 288
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2032869 2035535 + Carg07481-RA Car01g00361 141225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00361 288 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 9 287 IPR017334 GO:0003743|GO:0005737|GO:0005852
Car01g00361 288 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 207 285 IPR000504 GO:0003723
Car01g00361 288 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 209 275 IPR000504 GO:0003723
Car01g00361 288 Pfam Eukaryotic translation initiation factor 3 subunit G 30 157 IPR024675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00361 Car-Chr1:2032869 Car08g00694 Car-Chr8:4453432 9.65E-12 dispersed
Car13g00937 Car-Chr13:9586220 Car01g00361 Car-Chr1:2032869 7.00E-141 transposed
Car01g00361 Car-Chr1:2032869 Car14g00736 Car-Chr14:4132890 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00361 K03248 - csv:101207022 546.969