Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00364 ATGGCGGCTACGGCTGACCGGCTCCGCCCTGTCGTGACGTTTGCCGGCCAGGGGATTCGGTTTGATCAGGATTCGGCGGAGACTCCCCCTCTGCTCTCTAGGATGTTGTCTTATCCGATTGGGATTATTCACCACCAGTTGAGCCGCCGTCTCGGTGCCGGGAAGCCACAACCACCGCGGCGTCAGCAGTCTTTTAGTCGAGATTTTGGTCATGCTGCTGCGGAGACCGTTCTTGTTACTCGGTTGAGCTTCACTCTCCTTCGATCTCTTGGGGTAGGGTACCGGTGGATCGTAAGGTTAACTGCACTTGCAGTGTATGCCATTCTTCTTATGCCCGGTTTTCTTCAAGTTATGTATGATTATTTCTTCTCAAGTCAGATTCGGAGGAATATTATTTATGGAAATCAACCAAGAAATTGCTTGGATTTGTATTTACCTACAAATACTGATGAAAAAAAACCAGTTGTGATATTTGTTAGTGGCGGAGCTTGGATTATTGGGAATAAAGCATGGGGAGCTCTTTTAGGAATGCAGTTGGCAGAGAGAGATGTCATTGTAGCCTCAATTGACTATAGAAATTTCCCTCAGGGTACCATTAGTGACATGGTGACAGATGTTTCTCAAGGGATCTCATTTGTCTGCAAGAATATAGCAGACTATGGAGGAGATCCGGACAGAATCTTTCTAATGGGACAATCAGCTGGTGCACATATTTCCGTTTGTGCCCTCTTGGAGCAAGCAATCAAAGAAGCTGGAAAAGGAGAGAGCGTAGATTGGAGTGTTTCCCAAATGAAAGCTTATTTTGGTTTATCTGGAGGTTATAACTTGTCAAAACTAGTTGAGCACTTCGATAGTCGGGGTCTATATCGTTCTCTCTTTTTGAGCATAATGGAAGGTGAAGAATCTTTGGCCCAATTTTCCCCTGAAATAAGAATCCAAGATCCTAGCATCAGAGATGCTGTATCCAGCTTACCTCCTTTCGTTCTTTTTCATGGTACTGGTGATTACTCAATCCCATCGGATGCCAGTAAAACTTTTGTGGAGACACTCCGAAAAGTAGGGGCACAAGCTAACTTATTTCTCTACGAGGGAAAAACTCATACAGATTTGTTCCTTCAGGATCCTTTTCGGGGAGGCAGTTATGAACTTTTTGATCAACTAGTTGCCATATTACATGCCGGCGACGAGGAAGCTCTTGCAAAGGATTCCATGGCACCGCCAAAACCGCGTCTTGTTCCAGAGATTTTGATAAGATTGGCACGAATGGTTAGCCCTTTCTGA 1281 45.12 MAATADRLRPVVTFAGQGIRFDQDSAETPPLLSRMLSYPIGIIHHQLSRRLGAGKPQPPRRQQSFSRDFGHAAAETVLVTRLSFTLLRSLGVGYRWIVRLTALAVYAILLMPGFLQVMYDYFFSSQIRRNIIYGNQPRNCLDLYLPTNTDEKKPVVIFVSGGAWIIGNKAWGALLGMQLAERDVIVASIDYRNFPQGTISDMVTDVSQGISFVCKNIADYGGDPDRIFLMGQSAGAHISVCALLEQAIKEAGKGESVDWSVSQMKAYFGLSGGYNLSKLVEHFDSRGLYRSLFLSIMEGEESLAQFSPEIRIQDPSIRDAVSSLPPFVLFHGTGDYSIPSDASKTFVETLRKVGAQANLFLYEGKTHTDLFLQDPFRGGSYELFDQLVAILHAGDEEALAKDSMAPPKPRLVPEILIRLARMVSPF 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2045121 2050624 + Carg07484-RA Car01g00364 141228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00364 426 Pfam BD-FAE 141 350 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00364 Car-Chr1:2045121 Car04g01599 Car-Chr4:9241746 2.07E-176 dispersed
Car01g00364 Car-Chr1:2045121 Car14g00733 Car-Chr14:4114768 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00364 K15889 - csv:101206540 627.861