Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00385 ATGTTTTATCTTATTTGGTTTTCAGAAGCGTATGATCCGCTTGATCCAAATGGAAACATTACTATCAAGTGGGATGTTATAAGCTGGACCGCTGATGGCTATGTTGCTGTCGTTACTATGTATAATTTCCAACAATATCGTCATATTCAAGCACCGGGATGGTCTCTGCAATGGGGATGGGTTAAGAAAGAGGTCATATGGAGCATGTTGGGAGGCCAAGCAACCGAACAAGGTGATTGTTCGAGATATAAGGGGAACATCCCTCATAGCTGCAAGAGGGATCCAACCATTGTTGATCTATTGCCTGGGACTCCGTATAACCAGCAGATTGCAAATTGCTGCAAAGGCGGAGTTCTCAACTCCTGGGTGCAAGATCCAACTACTGCAGTGAGTTCATTTCAACTCAGTGTTGGTGCTGCGGGAACCTCGAATAAAACTGTCAGATTACCAAAGAACTTCACCTTAAAAGCACCTGGGCCTGGTTATACTTGTGGACCCGCAAAGATCGTTAGACCGACCAAATTCATTTCGTCTGACAAACGTAGGGTTACACAGGCCTTGATGACATGGAATATTACATGCACATATTCACAATTTCTGGCTCAAAAAACTCCGACTTGCTGTGTTTCGCTGTCATCATTTTACAACGACACGATTGTTTCTTGCCCTAAATGCTCGTGTGGTTGTCCAAACAACTTGAAGGGAGCCCAAAATTGTGTGGAGCCAAATTCTCCGCATTTAGCCTCTGTTGTTACCAATGCTAGTTCTAGCAATAACAATGTGGTACCTTCGGTTCAGTGTACAAGCCATATGTGCCCGATCCGAGTTCACTGGCATGTGAAGATTAACTATAAGGAGTATTGGCGTGCCAAGATCACAATTACAAACTTCAATTACGCGATGAACTATACAAATTGGAACTTAGTTGCCCAACATCCCAACTTCGACAATTTAACAACGATTTTCAGCTTCAACTACATGTCGATCAATCCATATGGAACTATAAATGATACTGCAGTCCTGTGGGGAGTCAAGTTCTACAATGATTTGCTCATGCAAGCAGGCCCTTCTGGGAATGTGCAGACAGAGCTACTTTTCCGAAAGAATCCATCGGTTTTCACATTCGATAAAGGCTGGGCTTTCCCTCGGAGGATTTATTTCAATGGCGACAACTGCGTCATGCCGCCTCCAGATGCCTATCCCCACTCACCAAACACGGGTTTGAAGCAAGGTGTCTCGTTGTTTACTACGCTATTGTCGATTTCCTTGACTCTCCTTTCCCTTCGCCATTTATTTGCATAA 1302 43.93 MFYLIWFSEAYDPLDPNGNITIKWDVISWTADGYVAVVTMYNFQQYRHIQAPGWSLQWGWVKKEVIWSMLGGQATEQGDCSRYKGNIPHSCKRDPTIVDLLPGTPYNQQIANCCKGGVLNSWVQDPTTAVSSFQLSVGAAGTSNKTVRLPKNFTLKAPGPGYTCGPAKIVRPTKFISSDKRRVTQALMTWNITCTYSQFLAQKTPTCCVSLSSFYNDTIVSCPKCSCGCPNNLKGAQNCVEPNSPHLASVVTNASSSNNNVVPSVQCTSHMCPIRVHWHVKINYKEYWRAKITITNFNYAMNYTNWNLVAQHPNFDNLTTIFSFNYMSINPYGTINDTAVLWGVKFYNDLLMQAGPSGNVQTELLFRKNPSVFTFDKGWAFPRRIYFNGDNCVMPPPDAYPHSPNTGLKQGVSLFTTLLSISLTLLSLRHLFA 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2190517 2192650 + Carg20374-RA Car01g00385 141249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00385 433 Pfam COBRA-like protein 34 197 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00385 Car-Chr1:2190517 Car11g00197 Car-Chr11:1137936 0 dispersed
Car01g00385 Car-Chr1:2190517 Car01g00386 Car-Chr1:2192880 1.58E-180 tandem
Car01g00385 Car-Chr1:2190517 Car14g01031 Car-Chr14:8957254 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00385 - - cmos:111457618 784.637