Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00386 ATGAGCTTGATTGTTTCGGCTGTTTTCCTTTTTGTCATATTTTCTCTTGGAGCTGCATATGATCCGTTGGATCCGAATGGGAACATTACGGTCAAATGGGACGTCATGTCTTGGACGCCTGATGGCTATGTGGCGGTTGTGACATTGAACAACTTCCAAATGTACCGGCACATAATGAGTCCCGGGTGGACGATGGGATGGACATGGGCGAAAAAGGAAGTGATATGGTCGATGGTCGGGTCGCAAACGACCGAGCAAGGCGATTGCTCCAAGTTCAAAGGAAACATTCCTCACTGTTGTAAGAAAACCCCCACTGTTGTGGATTTGATGCCAGGAGTTCCTTACAATCAGCAGTTTACAAACTGCTGCAAAGGTGGGGTTGTGGCAGCTTGGGGACAAGACCCTCAAGCTGCTGTTTCAGCCTTTCAGATCAGTGTTGGCCAAGCAGGTACTTCAAATAAGACTGTCAAACTCCCCAAGAACTTCACTCTGCTTGGTCCCGGCCCCGGGTACACTTGTGGCCCCGCCAAGGTCGTGCCTTCCACCACCTTCCTCACGCCCGACCGCCGTCGCAAAACTCAAGCTCTGAGTAAGAACACGTTCATTACAGTCCTCCATCTGCATTTTATCGACCTGTCGTGTGCAGTGAAATGTGACCTCAACTCTCAGTTTTTGGCTCTGTTGTGTTTCGTTCTCATCGTTCTAAGAACGACACGTCTCATGTGGTTGCCAAAACAAGAACAGCTGCATCAGTACAGATCAGACCTGAACTGTGTTATGCTTTGCAATGACTGCAGGAGTGATTCTAAGATTCTTAAGCTGGTTGGAATCAATACACCAAAGAAAGACAACACCCCGTTGCTACAGTGCACGCATCATATGTGCCCGGTTCGAGTTCACTGGCACGTGAAACAAAATTATAAGGAATACTGGCGGGTGAAGATCGCCATCACAAACTTCAACTACCGAATGAACTATTCGCTTTGGTCTCTCGTCGTCCAGCATCCAAATCTGAACAATGTAACCCAAGTTTTCAGCTTCAACTACAAACCCCTTGTTCCCTATGAATCAATCAATGACACGGGAATGTTCTACGGGACGAAGTTTTACAACGACCTTCTGATGGAAGCAGGGCCATTTGGGAATGTACAATCAGAGGTGTTGCTGCAAAAGGATCAGAACACCTTCACCTTTAAGCAGGGATGGGCATTCCCTCGGAAAGTTTACTTCAATGGCGACGAGTGCATGCTTCCACCACCGGACACATACCCGTTCCTGCCGAACACTGCCCGCCAAAGGCCCATTGCCCTCTCAACATCATTTGCTTTGCTGCTGCTCTTCCTGCTGCTAGCTATTTGCTGA 1362 48.38 MSLIVSAVFLFVIFSLGAAYDPLDPNGNITVKWDVMSWTPDGYVAVVTLNNFQMYRHIMSPGWTMGWTWAKKEVIWSMVGSQTTEQGDCSKFKGNIPHCCKKTPTVVDLMPGVPYNQQFTNCCKGGVVAAWGQDPQAAVSAFQISVGQAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTTFLTPDRRRKTQALSKNTFITVLHLHFIDLSCAVKCDLNSQFLALLCFVLIVLRTTRLMWLPKQEQLHQYRSDLNCVMLCNDCRSDSKILKLVGINTPKKDNTPLLQCTHHMCPVRVHWHVKQNYKEYWRVKIAITNFNYRMNYSLWSLVVQHPNLNNVTQVFSFNYKPLVPYESINDTGMFYGTKFYNDLLMEAGPFGNVQSEVLLQKDQNTFTFKQGWAFPRKVYFNGDECMLPPPDTYPFLPNTARQRPIALSTSFALLLLFLLLAIC 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2192880 2194608 - Carg20375-RA Car01g00386 141250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00386 453 Pfam COBRA-like protein 43 198 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00386 Car-Chr1:2192880 Car11g00198 Car-Chr11:1141442 0 dispersed
Car01g00385 Car-Chr1:2190517 Car01g00386 Car-Chr1:2192880 1.58E-180 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00386 - - csv:101217724 736.102