Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00400 ATGGCTGCCATGTACATCGATCCAAGGCTCAAACTCCAGATGGCCAAACCCCACCTTCAAAATGGAGGCACGTCAGAAGAGATTGAAGGGCTGATTCGAGTTTATGCAGATGGGCATGTTGAAAGGCCCCCAATCATCCCAAATGTAGCCTGCAGCACCACAGCATCAGACAAAGGCGTAACTGCAAAAGATGTTCTCATAGACATTTTCACAAACACTTGGGCGCGTATTTACATTCCTAACTCTCAACGAAACCTCCCTTTGCTTGTTTACTTCCATGGCGGTGGCTTTTGCGTCGGCTCTGCTGCCTGGAGCTGTTACCATGAATTCCTCCTCAATCTTGCTTCCAAAGCAAAATGTGTAATCCTCTCAATCAACTATCGTCTTTCCCCTGAAAATCGCCTCCCCGCCGCTTATGACGACGGATTCAACGCACTCATGTGGTTGAAACAGCAAGCAATAACCAACGCAATCGAACACAAATGGTGGTTAGGCAATTGCAATCCATCAAAATTGTTCCTCGCCGGCGATAGCGCTGGAGCAAACATAGCATACAACACCGCTACAAGGCTAGGGCACAACGAATCCACACTCCTAAAACCCCTAACTCTAAAGGGTATAATCCTAATCCAACCTTTCTTCGGCGGAGAATCGCGAACCAAATCAGAAAAGCTCGCCGCTACGCCCTCCTCCACCTCCGCGCTAACTCTCTCCGCCTCCGACACATACTGGCGGCTATCCCTTCCGCCGACGGCCAATCGAGACCACCCATGGAGCAACCCACTGGTGAATGGCAGCGCAAAGCTGAAAGAAATGAAACTTCCACCATTAATGGTAAGCATATCGGAGTTGGACATACTGTTGGACAGAAACTTAGAATTCTGTGCAGCCATGGCAGGAGCCGGGAAGAAAGTGGAGAGAGTGATTCTGAAGGGAGTTGGACATGGCTTCCAAATTCTGAACAAAGATCAGATCTCCACTCAGCGAACACAAGAACTGATGGGTTCCATTCGAGCTTTCATTCATCAACAATAG 1035 48.79 MAAMYIDPRLKLQMAKPHLQNGGTSEEIEGLIRVYADGHVERPPIIPNVACSTTASDKGVTAKDVLIDIFTNTWARIYIPNSQRNLPLLVYFHGGGFCVGSAAWSCYHEFLLNLASKAKCVILSINYRLSPENRLPAAYDDGFNALMWLKQQAITNAIEHKWWLGNCNPSKLFLAGDSAGANIAYNTATRLGHNESTLLKPLTLKGIILIQPFFGGESRTKSEKLAATPSSTSALTLSASDTYWRLSLPPTANRDHPWSNPLVNGSAKLKEMKLPPLMVSISELDILLDRNLEFCAAMAGAGKKVERVILKGVGHGFQILNKDQISTQRTQELMGSIRAFIHQQ 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2289505 2290539 - Carg20389-RA Car01g00400 141264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00400 344 Pfam alpha/beta hydrolase fold 89 318 IPR013094 GO:0016787
Car01g00400 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 172 184 IPR033140 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00400 Car-Chr1:2289505 Car18g00958 Car-Chr18:10174168 3.62E-129 dispersed
Car01g00400 Car-Chr1:2289505 Car04g01576 Car-Chr4:9133039 2.05E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00400 - - vvi:100241294 459.144