Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00441 ATGGGGTCCTGCTTGTCTGCGGAAAGCAGGAGCCCCATTCCTGGTTCCCCGACCTCTCCGGCTAAGCACTATCATCGAAGCAGGAGCAAGAGACGAAATGGTTCTCGGAGTTCTTCCTTTGGGGATCTGTCTCTCCATCGGATCCCTGGTAGGGTGTTCGGCAATGGCTTCACTGATTTCGCCTCTTTGTTCACGCAGCAGGGCAAGAAAGGAACCAATCAGGATGCCATGATTGTTTGGGAGAATTTTGGCTCTAGAACTGATACGATCTTCTGTGGGGTTTTCGATGGCCACGGCCCATACGGTCATATGGTTGCGAAGAAAGTGAGGGATTCTCTTCCTCTGAGGTTAAGTACACATTGGGAGGTCAACTTGACCACAGATGATGTTCTTAGAGAGATAAGCCTCAATACTGGAAGTGTGAACTCAGATGAAGCTACCTCCTTTTTATCTGCTGATGAAGAGTTTAGGGCATCCACTGATGGTGATGGAGCAGAAAAGCAACCTGAAATTTTCCATGCCTTGAAGGAATCATTTCTTAAGGCTTTTAGGGTTATGGATAGGGAACTCAGAATGCACCAAGGTATAGATAGCTTCTGTAGTGGGACAACAGCAGTGACTATGGTTAAACAGGGTCAGGATCTTGTCATTGGAAACGTTGGGGACTCCCGAGCTGTTCTGGGTACGAGAGATAAAGATGACTCTCTTGTTGCAATTCAATTGACTGTGGATCTGAAGCCAAATCTTCCAGCTGAAGCAGAGAGAATCCGTAAGTGTAGAGGTCGTGTCTTTGCTCTCCACGACGAACCTGATGTTCCTCGAGTTTGGCTTCCAAACAGCAACTCTCCTGGACTTGCCATGGCACGAGCATTCGGAGATTTCTGCCTCAAAGACTTTGGTCTAATCTCTGTACCTGAAATATCATATCGACGGCTCACTGAAAAAGACGAATTCATTGTTCTGGCTACAGATGGAATATGGGATGTGCTATCAAACAAAGAGGTTGTAAATGTCGTTGCATCGGCTCCAAAACGCTCTACTGCAGCTCGAACTTTAGTTGAGACAGCCGTGAAAGCATGGAAATATAAGTACCCAACTTCCAAGATTGATGACTGTGCGGTCGTTTGCCTTTTTCTTGACTCGAACTCCGGAAATCTATCATCTGCTTCCAATACCAAACCAGAGGTGCAACAAAGTTTAATAGATCACATCAGCAGTGCAGTTGAGAGTGAAGATTTCTCTAGCCCAAATGGTCTGAATCATTTGGGAACCGTCCAAATCTGCAAGGAAACTCCGGAGGATGGAAGCGAAGAAGAAGATGAATCGAAGGAGGAAGAACATTCAGAAATGGGAATAGAATGGTCTGCTCTGGAAGGCGTCTCACGCGTAAATACTCTGGTAAACCTGCCGAGATTCGATCCTGGAAAAGAAGATAAGAAAGGGCGGAAGTAA 1452 46.28 MGSCLSAESRSPIPGSPTSPAKHYHRSRSKRRNGSRSSSFGDLSLHRIPGRVFGNGFTDFASLFTQQGKKGTNQDAMIVWENFGSRTDTIFCGVFDGHGPYGHMVAKKVRDSLPLRLSTHWEVNLTTDDVLREISLNTGSVNSDEATSFLSADEEFRASTDGDGAEKQPEIFHALKESFLKAFRVMDRELRMHQGIDSFCSGTTAVTMVKQGQDLVIGNVGDSRAVLGTRDKDDSLVAIQLTVDLKPNLPAEAERIRKCRGRVFALHDEPDVPRVWLPNSNSPGLAMARAFGDFCLKDFGLISVPEISYRRLTEKDEFIVLATDGIWDVLSNKEVVNVVASAPKRSTAARTLVETAVKAWKYKYPTSKIDDCAVVCLFLDSNSGNLSSASNTKPEVQQSLIDHISSAVESEDFSSPNGLNHLGTVQICKETPEDGSEEEDESKEEEHSEMGIEWSALEGVSRVNTLVNLPRFDPGKEDKKGRK 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2524632 2528195 - Carg20430-RA Car01g00441 141305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00441 483 MobiDBLite consensus disorder prediction 431 455 - -
Car01g00441 483 ProSiteProfiles PPM-type phosphatase domain profile. 60 379 IPR001932 -
Car01g00441 483 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 467 - -
Car01g00441 483 Gene3D - 60 381 IPR036457 -
Car01g00441 483 PANTHER ALPHABET, ISOFORM E-RELATED 1 467 - -
Car01g00441 483 MobiDBLite consensus disorder prediction 1 42 - -
Car01g00441 483 Pfam Protein phosphatase 2C 153 357 IPR001932 -
Car01g00441 483 CDD PP2Cc 60 379 IPR001932 -
Car01g00441 483 MobiDBLite consensus disorder prediction 1 16 - -
Car01g00441 483 SUPERFAMILY PP2C-like 58 380 IPR036457 -
Car01g00441 483 SMART PP2C_4 49 377 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00441 Car-Chr1:2524632 Car11g00833 Car-Chr11:4987580 1.20E-163 dispersed
Car03g00283 Car-Chr3:3978011 Car01g00441 Car-Chr1:2524632 2.14E-109 dispersed
Car05g00962 Car-Chr5:9206584 Car01g00441 Car-Chr1:2524632 5.11E-120 dispersed
Car07g01197 Car-Chr7:7286803 Car01g00441 Car-Chr1:2524632 2.03E-112 dispersed
Car16g00965 Car-Chr16:8036771 Car01g00441 Car-Chr1:2524632 7.35E-165 transposed
Car01g00441 Car-Chr1:2524632 Car05g00767 Car-Chr5:5959827 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00441 - - csv:101222150 821.617