Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car01g00467 | ATGGCTTCCTTATCAATGGCTACCATTTTACCCCGTCTATCTCGTTTGGGGTTTGCGTCGAGATTTTCTTTAAACCCATTGTTTATGCTCCCCAAAAGTAGTAGAATCGAGAGATTGAATCGATTGAGACCCTTTTCGATGGCTTCGGTTCCTAAAGAATCTCCCGCAAACAATCCGGGACTTCACGCAACCCCCGACGATGCCACTAAAGGTTACATCATGCAACAGACTATGTTCCGGATTAAGGATCCTAAAGCCAGTCTTGACTTCTATTCTCGAGTTCTGGGCATGTCATTACTCAAGAGGCTGGATTTTCCTGAAATGAAGTTTAGCTTATACTTCTTGGGTTATGAGGATGTTGCTTCTGCCCCAGACAACGCAGTTGATAGAACGGTCTGGACTTTTGGTCGGAAGGCTACAATTGAGTTAACACACAACTGGGGTACTGAAAGTGACCCTGAATTTAAAGGATATCATAATGGGAACTCGGATCCTCGTGGCTTTGGACACATTGGTATAACTGTTGATGACACGTATAAGGCGTGCGAGAGATTTGAACGCCTAGGAGTGGAATTTGTTAAAAAACCAGATGACGGCAAGATGAAAGGTATTGCATTTATAAAGGATCCTGATGGCTACTGGATTGAAATCTTCGACCTCAAACTCATCGGAAACGTGACTACTAATGCTGCTTGA | 696 | 43.68 | MASLSMATILPRLSRLGFASRFSLNPLFMLPKSSRIERLNRLRPFSMASVPKESPANNPGLHATPDDATKGYIMQQTMFRIKDPKASLDFYSRVLGMSLLKRLDFPEMKFSLYFLGYEDVASAPDNAVDRTVWTFGRKATIELTHNWGTESDPEFKGYHNGNSDPRGFGHIGITVDDTYKACERFERLGVEFVKKPDDGKMKGIAFIKDPDGYWIEIFDLKLIGNVTTNAA | 231 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2727325 | 2730575 | - | Carg12290-RA | Car01g00467 | 141331 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car01g00467 | 231 | ProSiteProfiles | Vicinal oxygen chelate (VOC) domain profile. | 73 | 220 | IPR037523 | - | |
Car01g00467 | 231 | TIGRFAM | glyox_I: lactoylglutathione lyase | 62 | 225 | IPR004361 | GO:0004462|GO:0046872 | |
Car01g00467 | 231 | PANTHER | LACTOYLGLUTATHIONE LYASE | 33 | 227 | - | - | |
Car01g00467 | 231 | SUPERFAMILY | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 64 | 218 | IPR029068 | - | |
Car01g00467 | 231 | ProSitePatterns | Glyoxalase I signature 2. | 161 | 177 | IPR018146 | GO:0004462|GO:0046872 | |
Car01g00467 | 231 | PANTHER | LACTOYLGLUTATHIONE LYASE GLYOXALASE I | 33 | 227 | - | - | |
Car01g00467 | 231 | CDD | GlxI_Zn | 74 | 218 | - | - | |
Car01g00467 | 231 | Gene3D | - | 50 | 223 | IPR029068 | - | |
Car01g00467 | 231 | Pfam | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | 76 | 217 | IPR004360 | - | |
Car01g00467 | 231 | ProSitePatterns | Glyoxalase I signature 1. | 76 | 97 | IPR018146 | GO:0004462|GO:0046872 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car01g00467 | Car-Chr1:2727325 | Car11g00512 | Car-Chr11:2770294 | 7.01E-12 | dispersed | |
Car01g00467 | Car-Chr1:2727325 | Car05g01266 | Car-Chr5:11767111 | 8.01E-12 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car01g00467 | K01759 | - | mnt:21403510 | 380.178 |