Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00468 ATGGAGAAATCTGGATATGGTCGCGATGGAATTTTCAGGTCCTTACGGCCTCCGATCGTCTTTCCCAGAGATCCCAATTTGTCGGTGGCCTCTTTTCTTTTCCGAAACTCATCGTCTTATCCAAACAGACTCGCCATAGTTGATGCGGAATCTTCTGATTCCGTGTCGTATTCCCAGCTTAAAGCCTCTGCAATTAAGATCTCCAATGGTTTGCTCCAATTGGGTATTGAGAAAAACGACGTGGTGATGATTTTTGCTCCAAATTCTGTTGAATTCTCCATTTGTTTCATTGGAATTGTTGCTATTGGGGCTATTGTCACCACTTGTAATCCTGTTTACATGGTCTCTGAGTTAACCAAGCAAGTTAGAGATGCTAAGCCCAAACTTATGATATCTGTTGTTGAATTGTGGGACAAAGTGAAGGATCTAAACATCCCAACAGTGTTACTAGACCAGCAAATTCCTTCGGAAATCCAGTCCTCCAAAATTTTATGTTTCAATGATTTGATAAACATGGCTGGCGATAAATCTGGCTCCGAATTCCCAATTGTTGGGGTGAAGCAGAGTGATACAGCTGCTCTTCTGTATTCATCAGGAACAACAGGAGCCAGTAAGGGTGTGATTCTGACTCACAGAAACTTCATAACATCTTCACTGATGATAACATTGGATCAGAAGACTAATGGAGACGAAAATGGCACATATCTGAACTTTTTGCCGATGTTTCATGTGTTTGGATTGGTTTGTATAACATGTGCGCAGCTGCAGAGAGGAAACACCATTGTCTCTATGCCAAAGTTTAACCTGGAGAAGGCCCTGTGGGCAGTGGAGAAGTACAAGGTGACAGATCTGTGGGTTGTGCCGCCTGTTGTGCTTGCTTTGGCAAAGCAAAGTGTGGTAAAGAAATACAACCTTTCATCCCTGAAGCATATCGGTTCAGGGGCTGCACCTCTTGGGAAGGAATTAATGGATGAATGTGCTAACAACATTCCCAGTGCTGTGGTTCTCCAGGGTTATGGTATGACTGAGACTTGTGGAGTTGTTTCTTTGGAGAATCGAACAGTTGGCAAACGAAATACGGGTTCGGCTGGAACACTTGCCTCTGGTGTTGAGGCTCAAATAGTCAGCGTAGATACTTTGAAGCCTCTTCCTCCTAATCAATATGGAGAGATACTGGTTCGGGGACCGAATATGATGCTTGGTTACTTAAACAATCCACAGGCCACCAAGCAAACTATTGACAAATATGGCTGGGTGCATACTGGAGACCTTGGATACTTCGATGAAAATGGTCAGCTTTATGTTGTCGACAGAATTAAGGAACTCATCAAGTACAAAGGTTTTCAGGTTGCACCAGCCGAGCTTGAAGCACTGTTGGTCTCTCACCCTGAGATACTAGATGCTGTTGTCATCCCCTACCCCGACGATGAAGCTGGAGAAGTTCCAATCGCATATGTCGTGCGATCTACCAATAGTTCTATGACCGAAGAGGACGTCCTCAAATTCGTGGCCGATCAGGTTTCTCCTTACAAAAGGTTAAGAAGAGTGACATTCATCAACAGTGTCCCCAAGTCAGTTTCTGGGAAAATCCTGAGGAGAGAACTCATTGAGAAAGTAAGAGCTAAAATCTAA 1632 43.87 MEKSGYGRDGIFRSLRPPIVFPRDPNLSVASFLFRNSSSYPNRLAIVDAESSDSVSYSQLKASAIKISNGLLQLGIEKNDVVMIFAPNSVEFSICFIGIVAIGAIVTTCNPVYMVSELTKQVRDAKPKLMISVVELWDKVKDLNIPTVLLDQQIPSEIQSSKILCFNDLINMAGDKSGSEFPIVGVKQSDTAALLYSSGTTGASKGVILTHRNFITSSLMITLDQKTNGDENGTYLNFLPMFHVFGLVCITCAQLQRGNTIVSMPKFNLEKALWAVEKYKVTDLWVVPPVVLALAKQSVVKKYNLSSLKHIGSGAAPLGKELMDECANNIPSAVVLQGYGMTETCGVVSLENRTVGKRNTGSAGTLASGVEAQIVSVDTLKPLPPNQYGEILVRGPNMMLGYLNNPQATKQTIDKYGWVHTGDLGYFDENGQLYVVDRIKELIKYKGFQVAPAELEALLVSHPEILDAVVIPYPDDEAGEVPIAYVVRSTNSSMTEEDVLKFVADQVSPYKRLRRVTFINSVPKSVSGKILRRELIEKVRAKI 543
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2731620 2734945 + Carg12291-RA Car01g00468 141332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00468 543 Pfam AMP-binding enzyme C-terminal domain 454 529 IPR025110 -
Car01g00468 543 Pfam AMP-binding enzyme 35 445 IPR000873 -
Car01g00468 543 ProSitePatterns Putative AMP-binding domain signature. 194 205 IPR020845 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00468 Car-Chr1:2731620 Car14g00203 Car-Chr14:969482 0 dispersed
Car03g01311 Car-Chr3:10001897 Car01g00468 Car-Chr1:2731620 1.05E-30 dispersed
Car01g00468 Car-Chr1:2731620 Car01g01572 Car-Chr1:13071467 1.38E-156 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00468 K01904 - csv:101220141 959.903