Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00490 ATGGCCGCCGCTGCCGTGGATCCTTCGTCGCTGCAATTCACGCCGACTTGGGCCGTTGCTGCCGTCTGCTTCATCTTCATCTCTCTCTCTCTGTTCCTCGAGCATTTGATTCATCTCCTCTCCAATTGGCTGAAGCGGAAGAGGAAAACGGCATTATTCGATGCGGTTGAGAAGCTAAAATCAGTTCTGATGCTGCTAGGGTTCATGTCGCTAACACTGACGGTAACGCAACAGCCGGTATCGAAGATTTGTATTCCGAATAGCGTAGCGTATACGATGCTTCCATGCCAGAGAGAGATACAGATCAAAGCAGATAAGAATTTGGAGATGGAACAATCGCGATCAGCCTCCTCTGCAAATCGGTCGTTTTCATGGATGATGGAAAAATTCGTGAGCCTCGCAGCAGAAAGTGAAGATAGTGGTGGTGGTGATGATTCTTCTTCTTCATCATCATCTTCTTCATCTTCGGATTACTGTACTGCGAAGGGGAAGACCTCGCTGATATCCCAAGGAGGAATGAATCAACTGAACAACTTCATCTTCGTGTTGGCTGTTATGCAGATTGTTTACAGTGTCCTCACCATGGCTTTGGGAAAGGCCAAGATGAGGCGTTGGAAAGCTTGGGAGGAAGAAACTCATACCTTGGATTATCAAGTGGCCAATGATCCAAATCGGTTTAGATTTACAAGGCAAACAACGTTTGGACGTCGACATATTAGTTCTTGTGCATCACCACCATTACTTCTTTGGACGAAATGTTTCTTTAGACAATTCTTTCGTTCTGTTGCCAAAGTTGACTACCTAACCCTTCGTCATGGTTTTGTATCGACTCACATAGGTGGAAACACTTCTTTTAACTTCCAAAAGTATATTGAGAGATCGTTGCATGATGACTTCAAAGTCGTCGTTGGCATGAGTCCTTTCATGTGGCTCATAGTAGTTATCTTCATTCTCGTAGACGTGCATGGTTGGAATGCTTATCTGTGGGTGTCTTTTCTTCCACTAATGATAGTGCTAGCTCTTGGAACAAAGCTGGAAGTAATCGTAGCAAGGCTTGCCCTTGAGCTTCAACACAAGACCGATGTGATCAAAGGAGCCCCAATGGTTGAACCAAGTGATGATCTCTTCTGGTTCAATCACCCCAAATTTGTTCTTACCCTCCTTCATTTCACCTTGTTTATGAATGCATTCGAGCTTTCTTTTATCATTTGGGTCACGCTACAATATGGGATTAATTCTTGCTACCATGAGAAGTTGGTCGTCATCGTTATAAGAATAGTCTTGGCGGTCACAGTCCAAGTGTTGTGTAGCTACAGTACTCTACCTCTCTATGCTCTTGTCACACAGATGGGGTCACAGTTTAAAGCTGCAGCATTAGAAGAACATACCGCCAAAGCCATAAGGAAATGGCACCAAGATGTGAAGCAAAAGAGAAAACAGAGTAACCATCACCAGTACCCCAACGACCTAGACCCAAGCCAACACCAAGAGGGATCGTCTCCCTTCGTTGCTGGGCACTTGTCGTCAATGGTATTCGAGAGCAGTAGCAAAGCCCAAAGTTCCCAAGAGATGACCCCTTTCCATCATCGAGCCCCCACTTTTTCTGAGCTGAATTATCTCGACATTGTGTCTAATGAAATTGTTGAAGAACTCACAGAAACAATAAAAGATGAATCTATAGTTGTAGATAGGTCAATAGGAATAAAAATAGGAGAGATCAGTGAAGTTCACGAAGGAGAAACCGAAACCCATATCACATAA 1761 44.18 MAAAAVDPSSLQFTPTWAVAAVCFIFISLSLFLEHLIHLLSNWLKRKRKTALFDAVEKLKSVLMLLGFMSLTLTVTQQPVSKICIPNSVAYTMLPCQREIQIKADKNLEMEQSRSASSANRSFSWMMEKFVSLAAESEDSGGGDDSSSSSSSSSSSDYCTAKGKTSLISQGGMNQLNNFIFVLAVMQIVYSVLTMALGKAKMRRWKAWEEETHTLDYQVANDPNRFRFTRQTTFGRRHISSCASPPLLLWTKCFFRQFFRSVAKVDYLTLRHGFVSTHIGGNTSFNFQKYIERSLHDDFKVVVGMSPFMWLIVVIFILVDVHGWNAYLWVSFLPLMIVLALGTKLEVIVARLALELQHKTDVIKGAPMVEPSDDLFWFNHPKFVLTLLHFTLFMNAFELSFIIWVTLQYGINSCYHEKLVVIVIRIVLAVTVQVLCSYSTLPLYALVTQMGSQFKAAALEEHTAKAIRKWHQDVKQKRKQSNHHQYPNDLDPSQHQEGSSPFVAGHLSSMVFESSSKAQSSQEMTPFHHRAPTFSELNYLDIVSNEIVEELTETIKDESIVVDRSIGIKIGEISEVHEGETETHIT 586
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2878200 2882596 - Carg12313-RA Car01g00490 141354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00490 586 MobiDBLite consensus disorder prediction 137 157 - -
Car01g00490 586 Pfam Mlo family 10 489 IPR004326 GO:0006952|GO:0016021
Car01g00490 586 MobiDBLite consensus disorder prediction 141 157 - -
Car01g00490 586 MobiDBLite consensus disorder prediction 478 499 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00490 Car-Chr1:2878200 Car13g00158 Car-Chr13:1410225 0 dispersed
Car01g00490 Car-Chr1:2878200 Car13g00156 Car-Chr13:1378163 3.91E-162 wgd
Car01g00490 Car-Chr1:2878200 Car20g00418 Car-Chr20:2354140 6.07E-168 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00490 K08472 - csv:101221560 866.3