Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00528 ATGGGTGGAGACGGGGAAAACTATGGGAAAAAGGAACCTTTTGCTGCTAACATCTCGAATAACGAAACTTATCCTGCCTGGGCAACGGATGTTCGAGAATGCCTAGAGAAGTACCAAGTGAACCCTGATCTCGGATTATCTTCTGAGGAGGTTGAGAAACAGAGAAAGATCTACGGTTCCAATGAATTGGAGAAGCATGAGGGTACATCAATCTTTAAACTAGTTTTGGAACAACTTAATGATACACTAGTTAGGATTCTATTAGCTGCAGCAGTTGTATCTTTTGTTCTTGCGTGGTATGATGGTGAGGAAGGAGGTGAGATGGAGATTACAGCATTTGTGGAGCCTTTAGTTATTTTCTTGATATTGATTGTCAATGCCATTGTTGGCATTTGGCAAGAGAACAATGCTGAGAAAGCATTGGAAGCTCTTAAAGAAATTCAGTCTGAACAGGCTTCAGTAATACGAAATGGTAAACGTGTTTCAATTGTTTCCAAGGACATTGTTCCTGGTGATATAGTAGAACTCAGAGTTGGGGATAAGGTGCCTGCTGACATGCGAGTGTTGCGGTTAATCAGCTCAACTTTTCGGGTTGAGCAGGGGTCCTTGACTGGTGAGAGCGAAGCGGTGAGCAAGACGGCTAAGGCTGTGCCAGAAGATACAGACATACAAGGGAAAAAGTGTATGGTTTTTGCAGGGACAACAGTTGTCAATGGAAATTGTATTTGCCTTGTTACCCAGACAGGGATGAGCACTGAACTAGGACAAGTCCATTCTCAGATACAAGAAGCATCCCAGGGTGAAGATGATACACCATTGAAGAAGAAGTTGAATGAGTTTGGAGAGCTTTTAACAGCAATAATTGGAGTGATCTGTGCTCTAGTTTGGCTTATTAATGTCAAATACTTCCTCACTTGGGACTATGTTGATGGGTGGCCAGCAAATTTCAAGTTCTCATTTGAGAAATGTACGTATTACTTCGAGATTGCCGTGGCATTGGCTGTAGCTGCAATTCCTGAAGGTTTGCCTGCAGTCATAACTACATGCTTGGCACTTGGCACTCGGAAAATGGCCCAAAAGAATGCTCTTGTTCGGAAGCTGCCCAGTGTTGAAACTCTTGGCTGTACAACTGTGATATGTTCTGATAAGACAGGTACTCTAACAACTAATCAGATGGCTGTAGCGAAAATTGTGGCTCTCGGTTCTCGTGTTGGTACTCTGCGAGCCTTTGATGTGGAAGGGACTACATATGATCCTTCAGATGGAAAAATAATTGGTTGGCTTGGAGGTCAACTGGATGCTAATCTGCAAATGTTGGCAAAGATTGCCGCTGTCTGTAATGATGCAGTTGTTGAAAAATCTGGTCATCATTTTGTTGTGAATGGAATGCCTACTGAAGCAGCATTGAAGGTTCTTGTGGAAAAGATGGGTCTTCCTGAAGGATATGACTCCACTTCAGCTTCCATTGGGGATGTCCTGCGATGCTGCGACGTTTGGAATAAGAACGAGCAACGCATTGCTACTCTAGAGTTTGACCGAGATCGTAAATCAATGGGAGTTATTACAAATTCTAGCTCAGGAAAGAAGTCATTACTCGTGAAGGGTGCTGTTGAAAATCTTTTGGAACGGAGTTCATTTATTCAACTTATTGATGGATCTATTGTGAAGTTGGACTCAGACTCAAAAACCCACCTCTCAAGTTACTTGCGTGAGATGTCATCAAGTGCATTAAGGTGTTTAGGTTTTGCATACAAGGAAGACCTTCCAGAATTTTCCACTTACAATAGTGGTGACGAAGAACATCCAGCACATCGGCTTTTACTTGACCCGTCCAATTACTCTAAAATTGAACGTAATCTTATTTTTGCTGGCTTTGTTGGATTAAGGGATCCTCCCCGAAAAGAGGTTCATCAAGCAATCGAAGACTGTAAAGCTGCTGGTATTCGTGTCATGGTTATCACAGGGGACAACCAGAACACAGCCGAAGCTGTATGTCGAGAAATAGGTGTATTTGGACAACGTGAAGCTATAAGTTCCAGAAGTTTAACCGGAAAAGAGTTCATGGCAATGAGCCGGGAGGATCAAAAATCCCATTTAAGACAAGATAGAGGACTTCTTTTCTCAAGGGCTGAGCCAAGACATAAACAAGAGATAGTAAGATTGCTCAAGGAAGATGGTGAAGTTGTTGCCATGACAGGAGATGGAGTCAATGATGCACCTGCTTTGAAGTTGGCTGATATTGGGATTGCGATGGGCATTGCTGGGACAGAGGTTGCTAAGGAAGCCTCCGACATGGTTCTGGCAGATGACAATTTTAGTACAATAGTTGCAGCAGTTGGTGAAGGCAGATCCATTTACGACAATATGAAGGCATTTATCAGGTTTTTCTTCCACTTAAGCAAGAATTCATCCATTTTCGTTGATTATGTAGTAGTATGCCTTTGGACATTAGTTGTTGGTCATTGCCGTCTTCATAGGATTCAATTTTCACCGTGGCTTTCAAATGCCAAATATTATTGTAGGTACATGATTTCCTCAAACATCGGCGAGGTTGCGTCGATATTTTTGACAGCAGCACTGGGTATTCCCGAAGGGATGATCCCTGTTCAGCTTCTCTGGGTTAATCTCGTTACAGATGGACCTCCAGCTACTGCATTGGGATTTAATCCACCAGATACCGATATAATGAAGAAACCGCCTAGAAGAAGTGATGACTCGTTGATCACGGCCTGGATTTTGTTCCGCTATTTGGTTATTGGACTTTACGTAGGGATAGCAACTGTAGGAGTATTTATTATTTGGTATACACATGCTTCCTTCATGGGCATTGACCTGTCCGGAGATGGTCACAGTCTGGTCTCATACTCTCAGCTTGCAAACTGGGATCAGTGCCCGTCTTGGGAAGGGTTTACCGTGTCGCCTTTCATGGCTGGGGACCAAGTCTTCAGCTTCGATTCAGATCCATGCGACTACTTCCGTTCAGGCAAGATCAAGGCCTCAACTCTCTCACTCTCCGTTTTGGTCGCCATTGAGATGTTCAATTCCCTCAATGCCCTCTCAGAGGATGGAAGCTTGTTGACAATGCCCCCATGGGTTAACCCGTGGCTGCTCCTCGCCATGTCTGTTTCATTTGGCTTGCATTTCTTGATCCTCTATGTGCCATTCCTCGCACAAATTTTCGGCATTGTCCCCCTTTCCTTGAATGAATGGCTCTTGGTTCTGGCCGTGGCAATGCCCGTGATCTTAATCGATGAGATTCTGAAATTCGTGGGAAGGCTTACAAGCGGGTTGAGGACATCTCGCCCGAGCAGCAGATTGTTGAAGCAGAAATCAGACTAA 3339 43.91 MGGDGENYGKKEPFAANISNNETYPAWATDVRECLEKYQVNPDLGLSSEEVEKQRKIYGSNELEKHEGTSIFKLVLEQLNDTLVRILLAAAVVSFVLAWYDGEEGGEMEITAFVEPLVIFLILIVNAIVGIWQENNAEKALEALKEIQSEQASVIRNGKRVSIVSKDIVPGDIVELRVGDKVPADMRVLRLISSTFRVEQGSLTGESEAVSKTAKAVPEDTDIQGKKCMVFAGTTVVNGNCICLVTQTGMSTELGQVHSQIQEASQGEDDTPLKKKLNEFGELLTAIIGVICALVWLINVKYFLTWDYVDGWPANFKFSFEKCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICSDKTGTLTTNQMAVAKIVALGSRVGTLRAFDVEGTTYDPSDGKIIGWLGGQLDANLQMLAKIAAVCNDAVVEKSGHHFVVNGMPTEAALKVLVEKMGLPEGYDSTSASIGDVLRCCDVWNKNEQRIATLEFDRDRKSMGVITNSSSGKKSLLVKGAVENLLERSSFIQLIDGSIVKLDSDSKTHLSSYLREMSSSALRCLGFAYKEDLPEFSTYNSGDEEHPAHRLLLDPSNYSKIERNLIFAGFVGLRDPPRKEVHQAIEDCKAAGIRVMVITGDNQNTAEAVCREIGVFGQREAISSRSLTGKEFMAMSREDQKSHLRQDRGLLFSRAEPRHKQEIVRLLKEDGEVVAMTGDGVNDAPALKLADIGIAMGIAGTEVAKEASDMVLADDNFSTIVAAVGEGRSIYDNMKAFIRFFFHLSKNSSIFVDYVVVCLWTLVVGHCRLHRIQFSPWLSNAKYYCRYMISSNIGEVASIFLTAALGIPEGMIPVQLLWVNLVTDGPPATALGFNPPDTDIMKKPPRRSDDSLITAWILFRYLVIGLYVGIATVGVFIIWYTHASFMGIDLSGDGHSLVSYSQLANWDQCPSWEGFTVSPFMAGDQVFSFDSDPCDYFRSGKIKASTLSLSVLVAIEMFNSLNALSEDGSLLTMPPWVNPWLLLAMSVSFGLHFLILYVPFLAQIFGIVPLSLNEWLLVLAVAMPVILIDEILKFVGRLTSGLRTSRPSSRLLKQKSD 1112
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3084223 3089899 - Carg12351-RA Car01g00528 141392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00528 1112 Pfam Cation transporter/ATPase, N-terminus 27 94 IPR004014 -
Car01g00528 1112 Pfam haloacid dehalogenase-like hydrolase 377 746 - -
Car01g00528 1112 Pfam E1-E2 ATPase 147 360 - -
Car01g00528 1112 Pfam Cation transporting ATPase, C-terminus 864 1090 IPR006068 -
Car01g00528 1112 ProSitePatterns E1-E2 ATPases phosphorylation site. 382 388 IPR018303 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00528 Car13g00117 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00528 Car-Chr1:3084223 Car12g00547 Car-Chr12:3620443 0 dispersed
Car01g00528 Car-Chr1:3084223 Car13g00117 Car-Chr13:1022047 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00528 K01537 - csv:101206729 1902.1