Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00561 ATGCTTCCTCTTCTTCTTTTATTTGGTCTCCTCCTCCTCCTCCTCCTTTGCCTCCAATGGCGCCACCCCAACCACCACCTCCTCCCTCCTGGCTCCATGGGCTGGCCTTACATAGGCGAAACCTTCAAACTCTACACCCAAAACCCCAACTCCTTCTTCTCCATTAGGCAAAAAAGATATGGGGATGTGTTTAAGACACACATATTGGGGTGTCCATGTGTGATGATTTCAAGCCCTGAGGCTGCCAGAGTTGTGCTTGTGAGTAAGGCTCATCTCTTCAAGCCAACATACCCACCAAGCAAAGAGAAAATGATTGGCCCTCAAGCTTTGTTCTTCCACCAAGGCCCTTACCATTCTCGCCTCAAGAAGCTCATCCAAGCCTCCTTTTTGCCCTCTGCAATCAAACCCTCTGTCTCTCAAATTGAGAACATCGTGCTTCGCCTTTTACCCTCTTGGGATAACTCCCAAATCAATACCTTACAACAAATGAAAAGGTTTGCTTTTGATGTGGCGATGATCTCCGCTTTTGGTGACCAACAAGACTTGGAAATTGAGAGAATTAAACATCTGTACCAATGCCTTGAAAAAGGCTATAATTCTATGCCTCTTGATCTTCCCGGAACGCCTTTTCGTAAAGCAATGAAGGCGAGGAAGTTGCTGAGTGAGACATTGGGGAAATTGATTGAGAAAAGACAGCGGAGCAATGAGTATGGCGGTGGGTTGCTGGCGGTGCTTTTAGGCGGCGACGGCGACGGCGACAAAGTGGAGAAAAATAAGCTGAGTAATTCACAAATTGCTGATAACATAATAGGAGTGATCTTTGCAGCTCAAGACACGACAGCCAGTGTTCTAACATGGATTCTCAAGTACTTACATGATGATCACCATCTTCTTGAAGCTGTTAAGAAGGAGCAGGACGCCATATTTGAGGAGAGGGTGAGAGAAGGGGGGCGTGGGCTTACATGGGATGACACGAGGCGCATGACATTGACAAGTCGGGTGATCCAAGAAACCCTAAGAACAGCAAGTGTTCTGTCGTTCACGTTCAGAGAGGCAGTGGAAGAGGTGGAGTTCGAAGGTTATTTAATCCCAAGAGGATGGAAAGTTCTTCCGCTGTTCAGAACCATTCATCACTCTGCACATTTCTTCCCACACCCCGAGAAGTTTGATCCTTCAAGATTCGAGGTGCCACCCCGACCAAACACGTACATGCCATTTGGAAATGGAGTGCACTCATGTCCTGGCAGTGAGATGGCTAAGCTTGAAATCCTCATTCTTCTCCACCACCTCATCACCGGTTACAGGTCTCTTTTTATAATTTTTAGCTTCTTTTTACACGAGCTTAGTGTATGA 1353 46.78 MLPLLLLFGLLLLLLLCLQWRHPNHHLLPPGSMGWPYIGETFKLYTQNPNSFFSIRQKRYGDVFKTHILGCPCVMISSPEAARVVLVSKAHLFKPTYPPSKEKMIGPQALFFHQGPYHSRLKKLIQASFLPSAIKPSVSQIENIVLRLLPSWDNSQINTLQQMKRFAFDVAMISAFGDQQDLEIERIKHLYQCLEKGYNSMPLDLPGTPFRKAMKARKLLSETLGKLIEKRQRSNEYGGGLLAVLLGGDGDGDKVEKNKLSNSQIADNIIGVIFAAQDTTASVLTWILKYLHDDHHLLEAVKKEQDAIFEERVREGGRGLTWDDTRRMTLTSRVIQETLRTASVLSFTFREAVEEVEFEGYLIPRGWKVLPLFRTIHHSAHFFPHPEKFDPSRFEVPPRPNTYMPFGNGVHSCPGSEMAKLEILILLHHLITGYRSLFIIFSFFLHELSV 450
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3303511 3306093 + Carg12384-RA Car01g00561 141425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00561 450 Pfam Cytochrome P450 29 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car01g00561 450 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00561 Car-Chr1:3303511 Car04g00561 Car-Chr4:3175630 0 dispersed
Car01g00561 Car-Chr1:3303511 Car16g00453 Car-Chr16:2884958 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00561 K09843 - csv:101216531 737.258