Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00571 ATGGCGGAGGAGGAAGTGCCGATTTTAAGAACAGAGCATTCGCTTGATGTTTTGATTCCAGTAATTGCTAAGAAGAGGAATGTTTCTATTCCGAATCCCCTAGATGTAAACTGTTGTCGTTCTGGCTGTCCGTTTTCCAGATTAGAACATAGTAATCTAGAGTCATTAACACGATCGAAGTCCGCTATGAAGCTCGGTGGATTGATATTGTTCTATGTAATCGCTATCATTGTAGAGATTATTGGTGGCTTGAGAGCCAACAGTCTTTCTGTATTGACTGATGCAGCTCACTTGCTGAGTGATGTTGCTGGTTTCTCTGTTTCCCTCTTTGCTGTCTGGGTTTCAGGCTGGGCGGCCACACCACAACACTCATTTGGATTTAATCGCCTTGAAGTTATCGGTGCCCTTGTGTCTGTGCAGCTCATATGGCTGATTTCTGGGTTCTTAATCTACGAGGCAGCCAATCGGATCCTCGGCCACAAGACAAAGGTTAATGGATTGCTCATGTTCGCCATTGCAGCTTTTGGCTTCCTCCTTAACTTAGTTATGGTCATGTGGCTTGGCCATAGCCATAGCCATAGCCATAGCCATAGACATAGCCATAGCCATGGTCACTCTCATTCTTGTCATCATGATCACTTGGATCATGACACTGACCATGAGGAGGAGGGACATTCACACAGTTCAAGTTCGAACATAAATCTCCAAGGTGCTTATCTTCATCTCATCTCTGATATGATTCAATCTGTTGGTGTGATGGTTGCTGGAGCTGTTCTATGGCTTAAACCCAACTGGGTCGTGGTGGATTTAATCTGTACTCTTGTGTTTTCTGTTCTTGCTTTAGCTACTACTGTTCCCATGCTTAGACATATAGGTGGTATACTGATGGAAGGAACACCCAAGGAGATCAACATTGAGAGGCTAGAACATGATATCAAGAACATCAAAGGTGTTCTTGCTTTGCATGACTTGCATATTTGGTCAATAAGTGTCGGCAAAGTTGTGTTGTGTTGCCATGTTGTAGTTGATCATGGAGTTTGTGTTAGGGATACAATTTATAAGATTAGGAACCTCTGTGAAAAGAGATACAATATAATTCATACCACCATTCAAGTAGAGTAG 1122 42.87 MAEEEVPILRTEHSLDVLIPVIAKKRNVSIPNPLDVNCCRSGCPFSRLEHSNLESLTRSKSAMKLGGLILFYVIAIIVEIIGGLRANSLSVLTDAAHLLSDVAGFSVSLFAVWVSGWAATPQHSFGFNRLEVIGALVSVQLIWLISGFLIYEAANRILGHKTKVNGLLMFAIAAFGFLLNLVMVMWLGHSHSHSHSHRHSHSHGHSHSCHHDHLDHDTDHEEEGHSHSSSSNINLQGAYLHLISDMIQSVGVMVAGAVLWLKPNWVVVDLICTLVFSVLALATTVPMLRHIGGILMEGTPKEINIERLEHDIKNIKGVLALHDLHIWSISVGKVVLCCHVVVDHGVCVRDTIYKIRNLCEKRYNIIHTTIQVE 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3362317 3363438 + Carg12394-RA Car01g00571 141435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00571 373 MobiDBLite consensus disorder prediction 208 227 - -
Car01g00571 373 MobiDBLite consensus disorder prediction 197 231 - -
Car01g00571 373 Pfam Cation efflux family 69 296 IPR002524 GO:0006812|GO:0008324|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00571 Car-Chr1:3362317 Car17g00572 Car-Chr17:5402733 1.34E-44 dispersed
Car01g00571 Car-Chr1:3362317 Car11g00891 Car-Chr11:5542983 9.15E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00571 K14689 - csv:116403740 479.559