Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00642 ATGGTTGACAACGGCGAGGAGAAATTGCTGGCTATGGCTCGCCACATAGCCAAGACTATGGGCCGCAACGAGTCCATGGCCGATGATATTCTCCAGATTTTTTCCAATTTCGATGCTAGGTTTTCCCTTGACAAGCTCTCTGATAAATCCGATGAGGTTGATCCCAGAAGCTCTGTCGCTTTGCAGCGCTCTCTCAAGTCTTTGGACCGCCGGATCTCCCAATATTTGGCTGCTGACCACCCGATTTGGGCGGATTCAGCCGATTCCGCTGCTTTTCTTGACGCTATTGATGAGTTGATTGCTACGATTAGGGACTGGACGCCGATGGCTAGGGATAAGTCTGTTGGTACCTACCTTGCTCGCGCCGACGATCTGATGCAGCAGGCGATGTTTCGTGTAAGTGAAGAGTTTCGGTCGTTGATGGAGCGTGGAGGTGAGTCTTTTGAACTTACTCGGCATTTCAGGAACCGTGAGTCAACGGGCGAGTTTTTCTTCGATTCTGAGGAAGATGAGGAAGGTGCGGAAGGAATTCTTGGTGACGGCCTCCAGATCCCGGTGGCGCAGCCGGTGACAGACTACAACGTTGTAATCGATGCGCTTCCGTCGGGGACTATCAGCGATCTCCATGAGATAGCGAAGCGTATGGTGGCGGCTGGGTACGAGAAGGAGTGTTCGCACGCTTTCAGTAGCTGCAGGAGGGAGTTCTTAGAGGAGAGTCTTTCTAGGTTGGGGTTACAGAAGCTTAGCATCGATGAAGTTCAGAAGATGCAATGGCAAGACATGGAAGAGGAGATTGAGCGCTGGATGAAAGCGATTACCGTCTCCCTTCGAATCCTCTTCCCAAGCGAACGACGGCTCTGCGAACGAGTCTTCGTCGGCCTCTCCTCCGCCGCTGATCTCTCTTTCATGGAGGTCTGCCGAGGATCAACAATTCAGTTACTGAATTTTGCAGATGCGGTCGCAATCGGCTCGCGAGCGCCGGAACGGCTGTTCAAAATCCTCGACATGTTCGAGACCTTGAGAGACTTGATGCTGGATTTCGATTCAGTATTTTCGGATCAGTACTGCTTGTTACTTAGAAACGAAGCAATCGCAATCTGGAAAAGGTTAGGCGGAACAATCAAGGGGATCTTCATGGAGCTCGAGAATTTGATCCGTCGTGATCCGGCTAAAACTCCAGTTCCGGGGGGCGGCCTTCATCCAATTACTCGGTATGTGATGAATTACCTTAAAGCAGCCTGTAAATCACGGCAGACTTTGGAGCAAATTTTCGAAGAAGCCGCTCTTCCTTCGAAGGATTACACCAAACTCGATGACAGAGCAACAGCATCGTCTTCATTATCAGTTCAAATGGACTGGATTATGGAGCTTTTAGAGAGCAATTTAGAGGCAAAATCAAAGATATACAACGATCTATCCTTAAGCTCTGTGTTTCTGATGAACAATGGGCGATACATTGTTCAGAAAGTGAAAGACAGCGAATTAGGATCGGTTTTAGGGGACGATTGGATTCGAAAGCACTCGGTTAAGAACAGGCAATACCTCGGAAATTTCCTCAAAAGTTCATGGAGCAAGGTGGTCGGAGTATTGAAAATTGACAGTGGCTCCATAGCTCCAGCTGTAATGAAAGAGAAGCTGAAATCATTCAACATACAGTTCGAAGAACTCTGCCAAACCCAATCTACATGGGTGATATCCGAGAATCAGCTTAGAGAAGAAGCAAAAATCTCAGTTACCAAAATCCTAATGCCTGCATATCAAAACTTCATCGAAAGGTACCAGAGTTTGCCGGAGTTGTCGAAGCGTACAGACCGGCATTTGATGTACACGGCGAAGGATGTGGAGGCTCAGATCACCCAGCTGTTCCAAGGAGGCGGCGGAAGGAGGTAA 1890 48.73 MVDNGEEKLLAMARHIAKTMGRNESMADDILQIFSNFDARFSLDKLSDKSDEVDPRSSVALQRSLKSLDRRISQYLAADHPIWADSADSAAFLDAIDELIATIRDWTPMARDKSVGTYLARADDLMQQAMFRVSEEFRSLMERGGESFELTRHFRNRESTGEFFFDSEEDEEGAEGILGDGLQIPVAQPVTDYNVVIDALPSGTISDLHEIAKRMVAAGYEKECSHAFSSCRREFLEESLSRLGLQKLSIDEVQKMQWQDMEEEIERWMKAITVSLRILFPSERRLCERVFVGLSSAADLSFMEVCRGSTIQLLNFADAVAIGSRAPERLFKILDMFETLRDLMLDFDSVFSDQYCLLLRNEAIAIWKRLGGTIKGIFMELENLIRRDPAKTPVPGGGLHPITRYVMNYLKAACKSRQTLEQIFEEAALPSKDYTKLDDRATASSSLSVQMDWIMELLESNLEAKSKIYNDLSLSSVFLMNNGRYIVQKVKDSELGSVLGDDWIRKHSVKNRQYLGNFLKSSWSKVVGVLKIDSGSIAPAVMKEKLKSFNIQFEELCQTQSTWVISENQLREEAKISVTKILMPAYQNFIERYQSLPELSKRTDRHLMYTAKDVEAQITQLFQGGGGRR 629
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3785199 3787604 + Carg07035-RA Car01g00642 141506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00642 629 PANTHER EXOCYST COMPLEX COMPONENT EXO70B1 29 623 - -
Car01g00642 629 Pfam Exo70 exocyst complex subunit 266 619 IPR046364 GO:0000145|GO:0005546|GO:0006887
Car01g00642 629 SUPERFAMILY Cullin repeat-like 83 622 IPR016159 -
Car01g00642 629 Gene3D Exocyst complex component Exo70 82 628 - -
Car01g00642 629 PANTHER EXOCYST COMPLEX PROTEIN EXO70 29 623 IPR004140 GO:0000145|GO:0006887
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00642 Car13g00010 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00642 Car-Chr1:3785199 Car13g00651 Car-Chr13:8066683 2.70E-124 dispersed
Car01g00642 Car-Chr1:3785199 Car13g00010 Car-Chr13:108030 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00642 K07195 - csv:101204511 1077.77