Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00653 ATGAAATCTCAAAGGAACGACGCGTCGGAGCTTCTCTCCTCCGTCTCCACTTCCACGACTGTTTCGTCAACATATTTTTTAAACACGTTACACACAGGAGGTCACACTATTGGACTAGCGAGATGCAGCGAATTCAAAACCCGCATATACGAGAAGAGCAATATCGACGCTGGATTTGCAAAGAAGAGACAGCGACAGTGTCCCAAAGAACAGCGGATAGGCATCGACAATCTTGCTCCATTCGACATCCAAACGCCCATGGTTTTCGACAACAAGTACTTCGACAACCTTATTAAGAAGAAAGGTCTACTACATTCCGACCAGGTGCTGTTTTCCGGCGGCTCCACCGACTCTGTAGTTAAAAAGTACAGCCGAGACAGTGAGGCCTTCAATCGAGACTTCGTTCGAGCCATGGTTAAGATGGCTCACATGCAACCCCTCACTGGGTCCGATGGCGAGATTAGAAAAGTCTGCGGAAGACCCAATTGA 489 48.06 MKSQRNDASELLSSVSTSTTVSSTYFLNTLHTGGHTIGLARCSEFKTRIYEKSNIDAGFAKKRQRQCPKEQRIGIDNLAPFDIQTPMVFDNKYFDNLIKKKGLLHSDQVLFSGGSTDSVVKKYSRDSEAFNRDFVRAMVKMAHMQPLTGSDGEIRKVCGRPN 162
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3867496 3868589 + Carg07024-RA Car01g00653 141517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00653 162 Pfam Peroxidase 29 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car01g00653 162 ProSiteProfiles Plant heme peroxidase family profile. 27 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00653 Car-Chr1:3867496 Car10g00921 Car-Chr10:6989501 2.79E-51 dispersed
Car01g00652 Car-Chr1:3850259 Car01g00653 Car-Chr1:3867496 3.76E-28 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00653 K00430 - psom:113357801 177.178