Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car01g00663 | ATGCAAGATCCGGCGTCAAATCCCGATTCCTCCATCTCCAACAATGCTTCTACTCCCAATACTCATCTTCCGCCGCCGCCGCCGCCCTCTTCTACCAGACCCCACCACCGCAGGGCCCACTCCGAACTCACATTTCGCTTCCCTGATGACATCATGGATCTCTCTTCCTCTGATCCCTTCACTGCCGGATCCGCCGCCCTCGCTCTGGACGAGATCGGATCTGAGGACGACCTCTTTTCCACCTACATTGATGTAGACAAGCTTGGCCCCGGCACTTCTTCTGCAGATCACACCGCTAATGCTGAACCTGAGAAGACTCCCAGACCGAGGCATAGATATAGCAACTCTGTTGATGGTTCCACCTCTACCAGTGTGTTTGGGGATGTACTGGACGCCAAGAAAGCTATGCCTCCTGATAAACTAGCTGAGCTTTGGACTCTTGATCCCAAGCGCGCCAAGAGGATTTTGGCCAATCGACAGTCTGCTTCCCGTTCTAAAGAGAGGAAGGCACGATACATGCAGGAGCTCGAGCGCAAAGTTCAGACCCTTCAAACAGAGGCGACAACTCTTTCAGCTCAACTTGCACTGTTCCAGAGGGATACGACAGGTCTTAGTAGTGAAAATACAGAACTTAAGCTTCGGTTGCAGGCAATGGAGCAACAGGCTCATTTGCGGGATGCCTTGAATGAAGCACTAAAGAACGAAGTTGAGAGGCTAAAAGTAGCCACTGGAGAGACATCAGGCGCCTCCGATTCCTTCAACTTGGGGGGAATGCCTCATATGCCATATTTAGCATCCAGTTTCTTTCCCCTTCATCAGCAGCCAGGTTCTGCCGGCACCCACAACATGCTGCAGATGCCATTATACGGCCATTCCTCATCAAACATGTCAATACATCCTCTGCATCATCAGCTGAATTCACATCAATTCTCTGATACCATGCAGAGTGATCCACTTGGGCGATTACAGGGTCTGGATATCAGCAGCAATGGATCTCCTCTGGTGAAATCAGAAGTCCCTTCTCTTTCTGCTAGTGAAAGTAGCGCCACATTTTGA | 1056 | 50.76 | MQDPASNPDSSISNNASTPNTHLPPPPPPSSTRPHHRRAHSELTFRFPDDIMDLSSSDPFTAGSAALALDEIGSEDDLFSTYIDVDKLGPGTSSADHTANAEPEKTPRPRHRYSNSVDGSTSTSVFGDVLDAKKAMPPDKLAELWTLDPKRAKRILANRQSASRSKERKARYMQELERKVQTLQTEATTLSAQLALFQRDTTGLSSENTELKLRLQAMEQQAHLRDALNEALKNEVERLKVATGETSGASDSFNLGGMPHMPYLASSFFPLHQQPGSAGTHNMLQMPLYGHSSSNMSIHPLHHQLNSHQFSDTMQSDPLGRLQGLDISSNGSPLVKSEVPSLSASESSATF | 351 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 3913993 | 3917567 | - | Carg07014-RA | Car01g00663 | 141527 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car01g00663 | 351 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Car01g00663 | 351 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 148 | 211 | IPR004827 | GO:0003700|GO:0006355 | |
Car01g00663 | 351 | Coils | Coil | 166 | 193 | - | - | |
Car01g00663 | 351 | MobiDBLite | consensus disorder prediction | 90 | 120 | - | - | |
Car01g00663 | 351 | Coils | Coil | 225 | 245 | - | - | |
Car01g00663 | 351 | Pfam | bZIP transcription factor | 150 | 206 | IPR004827 | GO:0003700|GO:0006355 | |
Car01g00663 | 351 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Car01g00663 | 351 | MobiDBLite | consensus disorder prediction | 311 | 351 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car01g00663 | Car02g00508 | CCT | |
Car01g00663 | Car20g00269 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car01g00663 | Car-Chr1:3913993 | Car04g00101 | Car-Chr4:554890 | 4.19E-96 | dispersed | |
Car06g01370 | Car-Chr6:9850774 | Car01g00663 | Car-Chr1:3913993 | 2.39E-41 | dispersed | |
Car09g00980 | Car-Chr9:6250698 | Car01g00663 | Car-Chr1:3913993 | 4.92E-12 | dispersed | |
Car01g00663 | Car-Chr1:3913993 | Car02g00508 | Car-Chr2:3978344 | 6.42E-151 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
2823 | PF00170 | bZIP_1 | 1.30E-08 | CL0018 | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car01g00663 | - | - | cmo:103502961 | 414.846 |