Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00663 ATGCAAGATCCGGCGTCAAATCCCGATTCCTCCATCTCCAACAATGCTTCTACTCCCAATACTCATCTTCCGCCGCCGCCGCCGCCCTCTTCTACCAGACCCCACCACCGCAGGGCCCACTCCGAACTCACATTTCGCTTCCCTGATGACATCATGGATCTCTCTTCCTCTGATCCCTTCACTGCCGGATCCGCCGCCCTCGCTCTGGACGAGATCGGATCTGAGGACGACCTCTTTTCCACCTACATTGATGTAGACAAGCTTGGCCCCGGCACTTCTTCTGCAGATCACACCGCTAATGCTGAACCTGAGAAGACTCCCAGACCGAGGCATAGATATAGCAACTCTGTTGATGGTTCCACCTCTACCAGTGTGTTTGGGGATGTACTGGACGCCAAGAAAGCTATGCCTCCTGATAAACTAGCTGAGCTTTGGACTCTTGATCCCAAGCGCGCCAAGAGGATTTTGGCCAATCGACAGTCTGCTTCCCGTTCTAAAGAGAGGAAGGCACGATACATGCAGGAGCTCGAGCGCAAAGTTCAGACCCTTCAAACAGAGGCGACAACTCTTTCAGCTCAACTTGCACTGTTCCAGAGGGATACGACAGGTCTTAGTAGTGAAAATACAGAACTTAAGCTTCGGTTGCAGGCAATGGAGCAACAGGCTCATTTGCGGGATGCCTTGAATGAAGCACTAAAGAACGAAGTTGAGAGGCTAAAAGTAGCCACTGGAGAGACATCAGGCGCCTCCGATTCCTTCAACTTGGGGGGAATGCCTCATATGCCATATTTAGCATCCAGTTTCTTTCCCCTTCATCAGCAGCCAGGTTCTGCCGGCACCCACAACATGCTGCAGATGCCATTATACGGCCATTCCTCATCAAACATGTCAATACATCCTCTGCATCATCAGCTGAATTCACATCAATTCTCTGATACCATGCAGAGTGATCCACTTGGGCGATTACAGGGTCTGGATATCAGCAGCAATGGATCTCCTCTGGTGAAATCAGAAGTCCCTTCTCTTTCTGCTAGTGAAAGTAGCGCCACATTTTGA 1056 50.76 MQDPASNPDSSISNNASTPNTHLPPPPPPSSTRPHHRRAHSELTFRFPDDIMDLSSSDPFTAGSAALALDEIGSEDDLFSTYIDVDKLGPGTSSADHTANAEPEKTPRPRHRYSNSVDGSTSTSVFGDVLDAKKAMPPDKLAELWTLDPKRAKRILANRQSASRSKERKARYMQELERKVQTLQTEATTLSAQLALFQRDTTGLSSENTELKLRLQAMEQQAHLRDALNEALKNEVERLKVATGETSGASDSFNLGGMPHMPYLASSFFPLHQQPGSAGTHNMLQMPLYGHSSSNMSIHPLHHQLNSHQFSDTMQSDPLGRLQGLDISSNGSPLVKSEVPSLSASESSATF 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 3913993 3917567 - Carg07014-RA Car01g00663 141527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00663 351 MobiDBLite consensus disorder prediction 1 19 - -
Car01g00663 351 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 148 211 IPR004827 GO:0003700|GO:0006355
Car01g00663 351 Coils Coil 166 193 - -
Car01g00663 351 MobiDBLite consensus disorder prediction 90 120 - -
Car01g00663 351 Coils Coil 225 245 - -
Car01g00663 351 Pfam bZIP transcription factor 150 206 IPR004827 GO:0003700|GO:0006355
Car01g00663 351 MobiDBLite consensus disorder prediction 1 44 - -
Car01g00663 351 MobiDBLite consensus disorder prediction 311 351 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00663 Car02g00508 CCT
Car01g00663 Car20g00269 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00663 Car-Chr1:3913993 Car04g00101 Car-Chr4:554890 4.19E-96 dispersed
Car06g01370 Car-Chr6:9850774 Car01g00663 Car-Chr1:3913993 2.39E-41 dispersed
Car09g00980 Car-Chr9:6250698 Car01g00663 Car-Chr1:3913993 4.92E-12 dispersed
Car01g00663 Car-Chr1:3913993 Car02g00508 Car-Chr2:3978344 6.42E-151 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2823 PF00170 bZIP_1 1.30E-08 CL0018 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00663 - - cmo:103502961 414.846