Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00707 ATGAAACTCTCTAATACGAGTAACTGCACCTCGGATCCTCTCTTCTCTTCATATAAATTTGACCATTCCCACAATTCATCACCACCAACACAACAACCACCAAACATGGCCACTCAGCTCATTATCCTGTCGCTCATTTCCTTGTCACTCCTCGCCGCCGTTTCCCACACGGAAGCCCGCGCCATGAACATGAACGCCATCGATCGATGCTGGCGACCGAACCCATACTGGAGAAAAAACAGGCAAAAGCTGGCCCTTTGTTCAATTGGGTTCGTCGGAAAAATGACAAACAACATCGGAAGAAACCTGGTACACTACCAAGTCACGGACCCCAGCGACGACCCACTAACCCCACGCTCAGGCACCCTCAGATACGGCGCCACAATGATCAAACCCAAAGTGTGGATCACGTTTCAAAAAGACATGCACATTGTGCTCAACAAGCCGCTTCTTATTAGCAGCTACACGGCCATCGACGGCCGTGGCGCCACCGTCCACATCACGGGGAATGCGTGTCTGATGGTGTCCAGAGCCACCAATGTCATAATCCATGGGCTTATTATCCACCATTGCAAGGCCCAGGCGGCTGGCCGTGTAATGGGGCCGGGTTCGAAGATCGTTTCGTTGGGACACGTGGACGGTGATGCCATTCGTTTGGTTAGTGCTTCTAAGATTTGGATTGACCATAACACGCTGTATCGGTGTGAGGATGGGCTGATTGATGTCACTAGAGGCTCTACTGATATCACCATTTCTAACAATTGGTTGAGAGATCAAGATAAGGTTATACTTTTGGGTCACGACGATGATTATTTTCGGGACCGAAACATGAAGATCATATGGAGCACAGGCAAAGTAGAGAACGCCAAGTGGAAGTTCCATTCAGTAAGAGACGTTTTTGAAAACGGCGCTTCCTTCGCACAGATCGGCGCTGGCCGAGGCGGTGTCAAGCCAAATTACAATGCCCTGCAGCGCTTCCCAGTGGTAGACGCCAAGTGGTTGCGGTCATTGACAAGCTCTTCCGGCGCCCTGCGCTGCTCACCACGCTCAAGGTGTTGA 1059 50.99 MKLSNTSNCTSDPLFSSYKFDHSHNSSPPTQQPPNMATQLIILSLISLSLLAAVSHTEARAMNMNAIDRCWRPNPYWRKNRQKLALCSIGFVGKMTNNIGRNLVHYQVTDPSDDPLTPRSGTLRYGATMIKPKVWITFQKDMHIVLNKPLLISSYTAIDGRGATVHITGNACLMVSRATNVIIHGLIIHHCKAQAAGRVMGPGSKIVSLGHVDGDAIRLVSASKIWIDHNTLYRCEDGLIDVTRGSTDITISNNWLRDQDKVILLGHDDDYFRDRNMKIIWSTGKVENAKWKFHSVRDVFENGASFAQIGAGRGGVKPNYNALQRFPVVDAKWLRSLTSSSGALRCSPRSRC 352
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4211809 4213883 + Carg06970-RA Car01g00707 141571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00707 352 Pfam Pectate lyase 153 270 IPR002022 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00707 Car-Chr1:4211809 Car13g00610 Car-Chr13:7838479 9.22E-65 dispersed
Car01g00707 Car-Chr1:4211809 Car13g00945 Car-Chr13:9623081 1.25E-137 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00707 K01728 - csv:101217103 403.675