Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00740 ATGGATTGCAAGGAGCTCAATTTGAACGAAGATTGTGGAGGCTGTGGTAGCGGGGTAAAGAGTGGGGGAGATGGGTTTATAGACAGGAGCAAAGTTAGGATTTTGCTGTGCGATAATGATTCCAAAAGTGCAGATGAGGTTTACAAGCTTCTTTTGAAATGTTCCTACCAAGTCATTTCCGTGAGTTCGGCTAGACAGGTCATTGATGCTTTGAATGCGGAAGGACCTGAAATTGATATTATACTCTCGGAAGTTGACCTACCAATGGCCAAAGGTATGAAAATGTTGAAGTACATCACTCGGGATAAAGAGCTGCGACGCATTCCTGTTATCATGATGTCAACACAAGATGAGGTCCCTATAGTCGTTAAGTGCTTGAGGCTTGGAGCAGCTGACTATCTTGTAAAGCCGTTACGAACAAATGAGCTATTAAACTTATGGACACACATGTGGAGAAGAAGACGCATGCTTGGACTGGCAGAAAAGAACATCTTGAATTATGAATTTGATATGGTGGCATCAGACCCAAGTGATGCTAATACAAATAGTACTACTTTGTTCTCGGATGACACAGATGACAAGTCACGTAGGAGCACAAATCCGGAGATGGGAATTGCAACACATCAGGAAGATGAGGTTGGTATGACTTGGTTAACTTTTGAAACAAAGTCTGGTATTGCTTCTGCACTGGTAGAGCTTCCTGCTGTTTATTCTGTGGAACATCAGCCAGATGTACCTGGAATTAGTGAGCGTCGAACAGGGCAACTTTTATCATGCCCTAGAAAAAGTGAACTAAAGATCGGTGAATCATCTGCATTCTTTACATATGTCAAATCAAGAACTCTGAAAAACAAGGCAGTAGATGAAGAAGACAATGCCAAACGACTTTTGCTGGATGAAAATCATCAAGAAACTTGTCATCACCCAGTTCGTCTTCCCCAAATACAGGAAAGTGGGGAGGCCTTGGAAACCCATTCACAAGGAGACGAATTCCCAAGCAGTACTAGTTTTCCTGATTCTTTTTCTATGGAGAAATCTTGTACGCCACCTGCTGGCTCAGAAGTTCACAGGGAAGGAAACATCAATGAAGAAAATCGCTCTCAAGTGCATGTGCATCCTCAAAATGGATCTCAACATGATATGTCAGGCCTACCTGTGCAAACACAAACTGCTTATCCGTTCTATATGCCAGAAGGTATGATGTCGGCGCAACTGTACCAAAAGAACCTGCATGATATGCAAAATCGTGCGGCAATGATGTCACAATATGGTCAATTTCATCATTGTCCTCCCAATATAAGTGGGGTGGCATCTTATCCTTATTACCCTATGAATATATGTTTACAACCTGGTCAAATGTCAGCTTCTACTAATACTCATTCATGGCCATCTTTTGGAAATTCATCTTCCAATGAAGCAAAATCGAACAAATTGGATAGAAGAGAGGCTGCACTGATTAAATTTAGGCAGAAAAGGAAAGAGCGTTGTTTTGATAAGAAGATTAGGTATGTTAATAGGAAACGGCTTGCAGAGAGGAGGCCTCGTGTTCGAGGCCAGTTTGTTAGAAAGGTAAATGGTGTCAATGTAGATCTAAATGGACATCCTGCATCAGCTGATGATGTCGAGGATGAAGATGACGATGAGGAGCAACTATCAAGGGATTCCTCTCATGAAGATGATGTTTCAGGATATTAG 1695 41.89 MDCKELNLNEDCGGCGSGVKSGGDGFIDRSKVRILLCDNDSKSADEVYKLLLKCSYQVISVSSARQVIDALNAEGPEIDIILSEVDLPMAKGMKMLKYITRDKELRRIPVIMMSTQDEVPIVVKCLRLGAADYLVKPLRTNELLNLWTHMWRRRRMLGLAEKNILNYEFDMVASDPSDANTNSTTLFSDDTDDKSRRSTNPEMGIATHQEDEVGMTWLTFETKSGIASALVELPAVYSVEHQPDVPGISERRTGQLLSCPRKSELKIGESSAFFTYVKSRTLKNKAVDEEDNAKRLLLDENHQETCHHPVRLPQIQESGEALETHSQGDEFPSSTSFPDSFSMEKSCTPPAGSEVHREGNINEENRSQVHVHPQNGSQHDMSGLPVQTQTAYPFYMPEGMMSAQLYQKNLHDMQNRAAMMSQYGQFHHCPPNISGVASYPYYPMNICLQPGQMSASTNTHSWPSFGNSSSNEAKSNKLDRREAALIKFRQKRKERCFDKKIRYVNRKRLAERRPRVRGQFVRKVNGVNVDLNGHPASADDVEDEDDDEEQLSRDSSHEDDVSGY 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4502637 4506290 + Carg21687-RA Car01g00740 141604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00740 564 MobiDBLite consensus disorder prediction 539 553 - -
Car01g00740 564 Pfam Response regulator receiver domain 34 145 IPR001789 GO:0000160
Car01g00740 564 ProSiteProfiles CCT domain profile. 481 523 IPR010402 GO:0005515
Car01g00740 564 Pfam CCT motif 481 523 IPR010402 GO:0005515
Car01g00740 564 MobiDBLite consensus disorder prediction 320 347 - -
Car01g00740 564 MobiDBLite consensus disorder prediction 177 204 - -
Car01g00740 564 MobiDBLite consensus disorder prediction 320 357 - -
Car01g00740 564 MobiDBLite consensus disorder prediction 527 564 - -
Car01g00740 564 MobiDBLite consensus disorder prediction 455 477 - -
Car01g00740 564 ProSiteProfiles Response regulatory domain profile. 33 151 IPR001789 GO:0000160
Car01g00740 564 MobiDBLite consensus disorder prediction 455 473 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00740 Car-Chr1:4502637 Car02g00951 Car-Chr2:6706772 1.71E-15 dispersed
Car01g00740 Car-Chr1:4502637 Car11g00166 Car-Chr11:909897 0 wgd
Car01g00740 Car-Chr1:4502637 Car13g00976 Car-Chr13:9736380 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
2835 PF00072 Response_reg 6.10E-17 CL0304 Car TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00740 K12127 - csv:101220107 939.488