Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00745 ATGGCGCTGTTTAGAAAATTGTTCTGCCGGAAGCCTCCAGATCGGCTTCTAGAGATGTCGGAGAGAGTTTACGTGTTTGATTGTTGCTTCTCTACGGACGTCTTGGAAGCGGATGAATACAAAGTGTACTTTGCTAGCATTATACCAAAGCTGCAAGACCACTTTCCTGATGCTTCTTTCATGGTGTTTAACTTTAGTGAACGAAAGAGGAAGACTAGAACTTCAGATATATTGTCTCATTATGGTATGACAGTTATGGAGTATCCTCTGCAATATGAAGGGTGTCCACTACTGCCATTGGAGATGATCCACCACTTCATTCGGTCGAGTGAAAGCTGGTTGTCCTCTGAGAGACAGAAAAATGTATTGTTGATGAACTGTGAACAAGGAGGATGGCCAATTCTTGCTTTCATGCTTTCAGGTCTCTTATTGTACCGCAAACAATACGAGGGGGAGCAAAAGACCCTTGAAATGGTCTACAGGCAAGCTCCTAGAGAACTTTTCCATGTTCTTTCTCAGATAAACTCACAGCCTTCTCAAATGAGATACCTTCAGTATATTTCTAGGAGAAACCTAGGTTCTGATTGGCCTCCACCTGATACACCTCTAATTTTAGACTGTCTGATACTTCGGGACCTTCCGATGCTTGATGGAGGAAAAGGGTGCAGGCCTATCATACGCATTTACAGCCAGGACCCGTTAACACCACGAAATAAAAGTCCAAAACTTGCTTTTTCTAGTGCAAAGATGAAAAAACATGGTTGCCAGTATCTACAGGCAGCAAGCGGACTGGTAAAACTGGATGTCCATTGTCATGTTCAAGGGGATGTTGTTCTTGAGTGCATCCATTTAGATGGTGATCTAATACGCGAGGAAGTGATATTTAAAGTCATGTTTCACACGGCGTTTGTGCATTCAAACAGTTTGAAGCTCAATCGTGATGAGGTTGATATTATATGGGATGCCAAGGGGCAGTTTCCTAAAGATTTTAGAGTAGAGGTACTTTTTCTGGATCCTGATGATGCAGTGCCAAACGTCTCTCCTGTGACGAAAAGTGATGACAAAATTGAAATAGTAAGCAATTCGACTGAGGAGTTTTTTGAAGTGGAAGAAATATTTAGCAATATAGTTGACGTGCAGGAATACGATGTTCAAATGGTACATGCTAATGAAGTAGATGATATTGATCATCAAACAGTTTGGAAGGAAGATGCAGATCCTCCTACATTCCAACGCTGTAAATCTTTTGGAGGGAGTCGTAACTTGGACAAGAAGATCGATTGTAATGTTGAAGCAGTGAAGGACATCACTGTCGATGACGTGACTTTCAAGCGAGATGAAAAAATGGACTCTGGTCTTCATGTAGTGAAGGACATTGTTATGGATTATTCAGATAAAAAGCCAAATCCTCCGCTATTTTCTGTTAACGTACTGAGACGCATGGGAATCAAGGAACTGATAGACGATGTTTACAACAAGTTGGAAGAGGTTGAGCATCAAGGGTATCTAGAAGATACTGCTATTCCAGACTTCGAATCGAATGTTCCTGCGAAAAAGTTGGATTCTGATGCGTGGAGGCTTAAATATGAGAAGTTGCAGCCACTAGCATCTAGGAAACAGCCTTCGTCAACAGCTAAGCTATTAAATAATACAACCTTAGCTAAACAGAAGACCAAACAACCAGAAGATCAGGGCTCTCTTATTCAGGCAAAACCAAAAACTCTTTCTAGATGGACTCCACATGACAAAGAATCTTACATAAACTCCATGCATGTGTTTTATCCATCATCATGGCATACTGGTGCCTCAGCAACATGTATTAGTTCTCCTACTAGAGATTCTTATTCATATTCAACTTCAAAACCTGCTTCTATTACTTTAGGACTGCTGCTGTCAACTGATACAGCAGATGAACAAAACTGTAACATGGTGAGTCCTAGGCCTTTATGTTGTTCTGCAACAGAGATTCCCACGAGTAAACCGCAATCCCCACTTGGCTCCCCAAAACAATTACCAAATGCTGTTCTGCATCAAGATCCTACTCTACGGTCACCAGCTCTTCATGCTAACACGTCTTTCTTGCATACATCATCTCCTAAATCTTCTTTGCCACCCTCTTCATATATTCACATAAATGCTAGATCTCCACCACCTCCACCACCACCACCACCACTACCTCCTCCACCTTCCAGTCACGTGGCCTCTAAAAGTTCAGCGTTGGTGCGTGGAAATGCACCTAAGCATAGAGCTCCACCAGTACCACCTCCACCTCCTGTACGTAAAGCTCAACCACAATTACCTCCCCCACAGCCACCCCGTTCACCTGGAGCTTTGCTTTCTCCACGCCTATCTAATGCTGGAGCTTTTCCACCACCCCCTCCCCCACCTCCTCCAATTCAGAAAGCTCCTCCACATTTAACCCAAGGGCGACAGGCTTTAAAATCTCCAACAACCTGTGTGGTGTCATCATCATTGCCGTCTCCAATTTGTAATGTGCCATCACCTCCTCAACCTACGACAGGTCCCCTTCCACTGGTTCCTTCTCCTTCTAGACCTTCAGGAGGTATGTCTCCACACCCGGGAGCTAAAGGAGTAAATTCTTCAACTGATGTGAAAACATCATCTGTTGTGAGGGGACGTGGGTTCTCACGGTCATTGGGCACGGGGGTGGCTGCTACAGGAGCTCAACGATCATCATTAAAACCTCTGCATTGGAGCAAGGTGACTCGGGTACTACAAGGGAGCTTATGGGAAGAATTGCAAAGATTTGGAGATCCTGAAAGTGCACCAGAATTTGATGTAGCTGAGCTGGAGACACTTTTCTCTGTGACTGTCCCTAAACCTATTGTTGATTCAGGAGGTAAATCTGGAGGGCGAAGGAAGTCAGTTGGATCAAAATTGGACAAAGTTCACTTGATTGATCTTAGGCGGGCAAATAACACTGAAATCATGCTAACAAAAGTTAGAATGCCACTGTCTGACATGATGTATCAAACTGTTGGTGGCAAATTTCAGATCTTTTTGTGCTTGTTCTCGTACTGCATTCTTACTGTTACTGAAATTTCTCATGCAGCAGTTCTCTCCATGGATGAATCGATATTAGATGTAGATCAAGTGGAAAATCTTATCAAATTTTGCCCCACCAAAGAGGAGATGGAACTTCTCAAGGTGAAAGATCTTGGATACTGTGGTGACAAGGAAAAACTCGGAAAGTGCGAACAGTACTTTTTGGAGATGATGCAAGTGCCTCGTGTGGAGTCGAAGTTAAGAGTGTTCTCTTTTAAGATTCACTTCAGCTCTCAGATAGTAGAGTTCAAAAAAAGCCTAAAGACTGTAAACTCAGTCTGTCAAGAGGTGAAGAACTCTTGCAAATTGAAGGAAATATTGAAGAGAATTCTTTGCCTGGGGAATATGCTGAACCAAGGAACTGCTAGGGGTTCTGCCATTGGATTCAGGTTGGATAGTCTCTCGAAACTCACTGATACTCGTGCTACTAACAATAAGATGACTCTCATGCATTATCTCTGTAAGGTCCTTGCTTCGAAGTCACCGTCACTTCTTGATTTTCATCTGGACCTTAGTAGCTTGGAAGCTGCATCTAAGATACAATTGAAGTCTTTGGCGGAAGAAATGCAAGCAATAACAAAAGGATTGGAAAAGGTGAAGCAAGAACTAGTTGCATCTGAAAGCGACGGCCCCATCTCCGAAGCTTTTCGTAAGACATTGAAAGGATTTGTTACTCTTGCCGAGAAGGAGGTGGAATCTGTGACCGTTCTTTACTCAGTGACGGGTAGAAATGCGGATGCACTTACACAATATTTTGGCGAGGATCCTGCCCGCTGTCCATTTGAACAAGATTGTCCTGTTGGATGGATTATCCACAAGACAGCTCCAGCTGCTGAGAACCAAAGGAAGCTGGTGGAAGAAGAAAAGCCAAACCCTTCTAGGGAATTGAAAGAGAAGAAAAGTATAGAAAAGACTGTTGCATTTGCTGAGAGTATGAGGATTGAGTTGCAAATATGGGTGAAAAGAAGAGGAGTGTAA 4044 43.13 MALFRKLFCRKPPDRLLEMSERVYVFDCCFSTDVLEADEYKVYFASIIPKLQDHFPDASFMVFNFSERKRKTRTSDILSHYGMTVMEYPLQYEGCPLLPLEMIHHFIRSSESWLSSERQKNVLLMNCEQGGWPILAFMLSGLLLYRKQYEGEQKTLEMVYRQAPRELFHVLSQINSQPSQMRYLQYISRRNLGSDWPPPDTPLILDCLILRDLPMLDGGKGCRPIIRIYSQDPLTPRNKSPKLAFSSAKMKKHGCQYLQAASGLVKLDVHCHVQGDVVLECIHLDGDLIREEVIFKVMFHTAFVHSNSLKLNRDEVDIIWDAKGQFPKDFRVEVLFLDPDDAVPNVSPVTKSDDKIEIVSNSTEEFFEVEEIFSNIVDVQEYDVQMVHANEVDDIDHQTVWKEDADPPTFQRCKSFGGSRNLDKKIDCNVEAVKDITVDDVTFKRDEKMDSGLHVVKDIVMDYSDKKPNPPLFSVNVLRRMGIKELIDDVYNKLEEVEHQGYLEDTAIPDFESNVPAKKLDSDAWRLKYEKLQPLASRKQPSSTAKLLNNTTLAKQKTKQPEDQGSLIQAKPKTLSRWTPHDKESYINSMHVFYPSSWHTGASATCISSPTRDSYSYSTSKPASITLGLLLSTDTADEQNCNMVSPRPLCCSATEIPTSKPQSPLGSPKQLPNAVLHQDPTLRSPALHANTSFLHTSSPKSSLPPSSYIHINARSPPPPPPPPPLPPPPSSHVASKSSALVRGNAPKHRAPPVPPPPPVRKAQPQLPPPQPPRSPGALLSPRLSNAGAFPPPPPPPPPIQKAPPHLTQGRQALKSPTTCVVSSSLPSPICNVPSPPQPTTGPLPLVPSPSRPSGGMSPHPGAKGVNSSTDVKTSSVVRGRGFSRSLGTGVAATGAQRSSLKPLHWSKVTRVLQGSLWEELQRFGDPESAPEFDVAELETLFSVTVPKPIVDSGGKSGGRRKSVGSKLDKVHLIDLRRANNTEIMLTKVRMPLSDMMYQTVGGKFQIFLCLFSYCILTVTEISHAAVLSMDESILDVDQVENLIKFCPTKEEMELLKVKDLGYCGDKEKLGKCEQYFLEMMQVPRVESKLRVFSFKIHFSSQIVEFKKSLKTVNSVCQEVKNSCKLKEILKRILCLGNMLNQGTARGSAIGFRLDSLSKLTDTRATNNKMTLMHYLCKVLASKSPSLLDFHLDLSSLEAASKIQLKSLAEEMQAITKGLEKVKQELVASESDGPISEAFRKTLKGFVTLAEKEVESVTVLYSVTGRNADALTQYFGEDPARCPFEQDCPVGWIIHKTAPAAENQRKLVEEEKPNPSRELKEKKSIEKTVAFAESMRIELQIWVKRRGV 1347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4513928 4523886 - Carg21692-RA Car01g00745 141609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00745 1347 MobiDBLite consensus disorder prediction 786 803 - -
Car01g00745 1347 Pfam Formin Homology 2 Domain 1016 1285 IPR015425 -
Car01g00745 1347 Pfam Formin Homology 2 Domain 896 996 IPR015425 -
Car01g00745 1347 MobiDBLite consensus disorder prediction 862 877 - -
Car01g00745 1347 Coils Coil 1204 1224 - -
Car01g00745 1347 MobiDBLite consensus disorder prediction 748 776 - -
Car01g00745 1347 MobiDBLite consensus disorder prediction 711 731 - -
Car01g00745 1347 MobiDBLite consensus disorder prediction 810 828 - -
Car01g00745 1347 MobiDBLite consensus disorder prediction 654 673 - -
Car01g00745 1347 MobiDBLite consensus disorder prediction 692 877 - -
Car01g00745 1347 MobiDBLite consensus disorder prediction 829 854 - -
Car01g00745 1347 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Car01g00745 1347 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Car01g00745 1347 MobiDBLite consensus disorder prediction 692 709 - -
Car01g00745 1347 MobiDBLite consensus disorder prediction 655 669 - -
Car01g00745 1347 ProSiteProfiles Formin homology-2 (FH2) domain profile. 890 1326 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00745 Car-Chr1:4513928 Car01g01277 Car-Chr1:11572988 3.76E-132 dispersed
Car01g00745 Car-Chr1:4513928 Car10g00196 Car-Chr10:937448 0 wgd
Car01g00745 Car-Chr1:4513928 Car11g00171 Car-Chr11:942519 7.59E-37 wgd
Car01g00745 Car-Chr1:4513928 Car13g00929 Car-Chr13:9535938 1.73E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00745 - - bhj:120083459 1948.33