Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00746 ATGGGGTGTGTCAACACGAAGCATGCCGTGTCCGTTACGCCTGCATTCGATCACTCCGGTGTGTTTCGGGACAATGAATCCACGGCGATCGGCAACTCGGGTCGGAGCCGACTTGGGTTTGGGGAGATTGACAAGGGTTCGAAGCCCAAGTCCAAGACGAGGACGAAAGGGTCCCGTGACTTCAATGGGGTTGCGAGCGAGTTCGGTGAGTCGGGTCGAGCGAGTTCTAATGGCGGTGGGAATGATACTTTGAGCTTCCGAATCGGGAATTTTAATAAGTATATGGAAAGTGAGCAAGTGGCGGCGGGATGGCCTGCTTGGCTCTGCGCCGTCGCCGGTGAAGCCATTCAGGGCTGGGTTCCACTCCGCTCTGATGCCTATGAAAAATTGGAGAAGATTGGACAAGGTACATATAGTACTGTATTCCGAGCACGTGAACTCGAGACAGGAAGGATAGTCGCTTTAAAGAAGGTCCGTTTCGATAATTTCGAGCCCGAAAGTGTTCGGTTTATGGCACGAGAGATCATGATTCTGCGCAGGCTTGATCACCCCAATATCATCAAATTGGAGGGCTTAATCACGTCTCGTTTATCATGTAGCATTTACCTTGTGTTCGAGTACATGGATCATGACATTACTGGACTCTTGTCTTGCCCCGACATCACTTTTAGTGAATCACAGATTAAATGTTACATGAAGCAATTGTTATCCGGGCTCGAGCATTGTCACTCACGTGGCGTAATGCATCGAGATATTAAAGGGTCTAATCTTCTAGTCAATAATGAAGGGGTATTGAAGGTGGCTGATTTTGGTTTGGCAAACTTCTGTAATTCGGGGCACCGACAACCTCTAACCAGTCGTGTTGTCACGCTATGGTATCGTCCTCCTGAACTTCTACTCGGCTCAACGGACTACAATGCATCTGTGGATCTTTGGAGCGTTGGCTGTGTTTTTGCAGAACTCCTTGTTGGGAAACCTATTCTTCAAGGAAGAACAGAGGTTGAACAGCTACACAAGATCTTCAAGCTTTGTGGCTCTCCTCCTGATGAATACTGGAAAAAATCTAAGCTTCCACATGCCACTTTGTTCAAACCACAACATCCTTACAACAATTGTTTACGGCAGACGTTCAAAGATTATCCTTCGACGACCGTGAACTTGTTAGAAACTCTTCTTTCTGTCGAACCATACAAGCGCGGAGTTGCATCCTCTGCTCTCACATCTGAGTATTTCAGTACAAAACCGCATGCATGTGATCCATCAAGCATGCCAATATATCCACCAAGCAAAGAGATTGATGCAAAACAAAGAGAGGAGTCTAGAAGGAAAAAAGGCAGTGGAAGAACCCGTGGATTAGATAGTAGACGGTTAACTCGAAAGCATCTCGGAATCAGTAAATTAGCACCAGCAGAGGACTTATCGGTTTCTGCTCGAGATTTGCATAAGATTAGTATTAATGCTCAAAATCTTAAAGAAGAGAAGGTTATCAAGGGTGGTGAGATGAAAAAGCTTTCAAATGATAAATTGGAAGAGTCTATGCATGTGAAGAATGCATCCCAAGGAGACATTCCTTTCTCTGGCCCCCTACAAGTTTCTACATCAAGTGGCTTTGCGTGGGCAAGACGACGAAGAGACGAAGCGTCTATTAGATCGCATTCGAGATCGATTTCACGAGGACACGTAATTAATGGGCTGGATCATTCTGCTATATTGCATTCAAGAAGCAATGTGGACTCTAAGTTTCATGAAAAGGGAGACATGTTGTCCATCAGCTGTTCAAGTTCGAAGGGACGTGAATCAAACGAGCGATCCAAGGTTGTGATACGGAATCAATGGGGCAAGTTTGAGCGTCCCGATTCGTTTGATGCTTCGGATGAGTACCATTCGCAGGATTTTTCAGTGGCACTCTACTTGCAAGATGAAATGGAAGCTAAGAGGAGTAATCTGAGTTATCAGGACCAGGTGGACAAAGTTGAATACTCTGGGCCCTTGTTATCTCAATCGAGCCGAGTGGATGAACTCCTAGACAGACACGAGAGGCACATCCGACAGACAGTTCGAAGATCGTGGTTCCAAAGAGGTACATTACATTTCACCTCAATGTCAGCATTTTCTCTTGATATGTTTGCCACATGA 2136 45.83 MGCVNTKHAVSVTPAFDHSGVFRDNESTAIGNSGRSRLGFGEIDKGSKPKSKTRTKGSRDFNGVASEFGESGRASSNGGGNDTLSFRIGNFNKYMESEQVAAGWPAWLCAVAGEAIQGWVPLRSDAYEKLEKIGQGTYSTVFRARELETGRIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMDHDITGLLSCPDITFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGVLKVADFGLANFCNSGHRQPLTSRVVTLWYRPPELLLGSTDYNASVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKSKLPHATLFKPQHPYNNCLRQTFKDYPSTTVNLLETLLSVEPYKRGVASSALTSEYFSTKPHACDPSSMPIYPPSKEIDAKQREESRRKKGSGRTRGLDSRRLTRKHLGISKLAPAEDLSVSARDLHKISINAQNLKEEKVIKGGEMKKLSNDKLEESMHVKNASQGDIPFSGPLQVSTSSGFAWARRRRDEASIRSHSRSISRGHVINGLDHSAILHSRSNVDSKFHEKGDMLSISCSSSKGRESNERSKVVIRNQWGKFERPDSFDASDEYHSQDFSVALYLQDEMEAKRSNLSYQDQVDKVEYSGPLLSQSSRVDELLDRHERHIRQTVRRSWFQRGTLHFTSMSAFSLDMFAT 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4527449 4531944 - Carg21693-RA Car01g00746 141610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00746 711 MobiDBLite consensus disorder prediction 413 457 - -
Car01g00746 711 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Car01g00746 711 ProSiteProfiles Protein kinase domain profile. 127 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00746 711 Pfam Protein kinase domain 127 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g00746 711 MobiDBLite consensus disorder prediction 41 57 - -
Car01g00746 711 MobiDBLite consensus disorder prediction 431 457 - -
Car01g00746 711 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524
Car01g00746 711 MobiDBLite consensus disorder prediction 23 79 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00746 Car-Chr1:4527449 Car16g00361 Car-Chr16:2244419 0 dispersed
Car01g00746 Car-Chr1:4527449 Car13g00928 Car-Chr13:9527951 3.14E-57 wgd
Car01g00746 Car-Chr1:4527449 Car15g00250 Car-Chr15:1373471 0 wgd
Car01g00746 Car-Chr1:4527449 Car04g02684 Car-Chr4:20830013 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88593 PF00069 Pkinase 7.50E-69 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00746 - - csv:101220347 1264.21