Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car01g00746 | ATGGGGTGTGTCAACACGAAGCATGCCGTGTCCGTTACGCCTGCATTCGATCACTCCGGTGTGTTTCGGGACAATGAATCCACGGCGATCGGCAACTCGGGTCGGAGCCGACTTGGGTTTGGGGAGATTGACAAGGGTTCGAAGCCCAAGTCCAAGACGAGGACGAAAGGGTCCCGTGACTTCAATGGGGTTGCGAGCGAGTTCGGTGAGTCGGGTCGAGCGAGTTCTAATGGCGGTGGGAATGATACTTTGAGCTTCCGAATCGGGAATTTTAATAAGTATATGGAAAGTGAGCAAGTGGCGGCGGGATGGCCTGCTTGGCTCTGCGCCGTCGCCGGTGAAGCCATTCAGGGCTGGGTTCCACTCCGCTCTGATGCCTATGAAAAATTGGAGAAGATTGGACAAGGTACATATAGTACTGTATTCCGAGCACGTGAACTCGAGACAGGAAGGATAGTCGCTTTAAAGAAGGTCCGTTTCGATAATTTCGAGCCCGAAAGTGTTCGGTTTATGGCACGAGAGATCATGATTCTGCGCAGGCTTGATCACCCCAATATCATCAAATTGGAGGGCTTAATCACGTCTCGTTTATCATGTAGCATTTACCTTGTGTTCGAGTACATGGATCATGACATTACTGGACTCTTGTCTTGCCCCGACATCACTTTTAGTGAATCACAGATTAAATGTTACATGAAGCAATTGTTATCCGGGCTCGAGCATTGTCACTCACGTGGCGTAATGCATCGAGATATTAAAGGGTCTAATCTTCTAGTCAATAATGAAGGGGTATTGAAGGTGGCTGATTTTGGTTTGGCAAACTTCTGTAATTCGGGGCACCGACAACCTCTAACCAGTCGTGTTGTCACGCTATGGTATCGTCCTCCTGAACTTCTACTCGGCTCAACGGACTACAATGCATCTGTGGATCTTTGGAGCGTTGGCTGTGTTTTTGCAGAACTCCTTGTTGGGAAACCTATTCTTCAAGGAAGAACAGAGGTTGAACAGCTACACAAGATCTTCAAGCTTTGTGGCTCTCCTCCTGATGAATACTGGAAAAAATCTAAGCTTCCACATGCCACTTTGTTCAAACCACAACATCCTTACAACAATTGTTTACGGCAGACGTTCAAAGATTATCCTTCGACGACCGTGAACTTGTTAGAAACTCTTCTTTCTGTCGAACCATACAAGCGCGGAGTTGCATCCTCTGCTCTCACATCTGAGTATTTCAGTACAAAACCGCATGCATGTGATCCATCAAGCATGCCAATATATCCACCAAGCAAAGAGATTGATGCAAAACAAAGAGAGGAGTCTAGAAGGAAAAAAGGCAGTGGAAGAACCCGTGGATTAGATAGTAGACGGTTAACTCGAAAGCATCTCGGAATCAGTAAATTAGCACCAGCAGAGGACTTATCGGTTTCTGCTCGAGATTTGCATAAGATTAGTATTAATGCTCAAAATCTTAAAGAAGAGAAGGTTATCAAGGGTGGTGAGATGAAAAAGCTTTCAAATGATAAATTGGAAGAGTCTATGCATGTGAAGAATGCATCCCAAGGAGACATTCCTTTCTCTGGCCCCCTACAAGTTTCTACATCAAGTGGCTTTGCGTGGGCAAGACGACGAAGAGACGAAGCGTCTATTAGATCGCATTCGAGATCGATTTCACGAGGACACGTAATTAATGGGCTGGATCATTCTGCTATATTGCATTCAAGAAGCAATGTGGACTCTAAGTTTCATGAAAAGGGAGACATGTTGTCCATCAGCTGTTCAAGTTCGAAGGGACGTGAATCAAACGAGCGATCCAAGGTTGTGATACGGAATCAATGGGGCAAGTTTGAGCGTCCCGATTCGTTTGATGCTTCGGATGAGTACCATTCGCAGGATTTTTCAGTGGCACTCTACTTGCAAGATGAAATGGAAGCTAAGAGGAGTAATCTGAGTTATCAGGACCAGGTGGACAAAGTTGAATACTCTGGGCCCTTGTTATCTCAATCGAGCCGAGTGGATGAACTCCTAGACAGACACGAGAGGCACATCCGACAGACAGTTCGAAGATCGTGGTTCCAAAGAGGTACATTACATTTCACCTCAATGTCAGCATTTTCTCTTGATATGTTTGCCACATGA | 2136 | 45.83 | MGCVNTKHAVSVTPAFDHSGVFRDNESTAIGNSGRSRLGFGEIDKGSKPKSKTRTKGSRDFNGVASEFGESGRASSNGGGNDTLSFRIGNFNKYMESEQVAAGWPAWLCAVAGEAIQGWVPLRSDAYEKLEKIGQGTYSTVFRARELETGRIVALKKVRFDNFEPESVRFMAREIMILRRLDHPNIIKLEGLITSRLSCSIYLVFEYMDHDITGLLSCPDITFSESQIKCYMKQLLSGLEHCHSRGVMHRDIKGSNLLVNNEGVLKVADFGLANFCNSGHRQPLTSRVVTLWYRPPELLLGSTDYNASVDLWSVGCVFAELLVGKPILQGRTEVEQLHKIFKLCGSPPDEYWKKSKLPHATLFKPQHPYNNCLRQTFKDYPSTTVNLLETLLSVEPYKRGVASSALTSEYFSTKPHACDPSSMPIYPPSKEIDAKQREESRRKKGSGRTRGLDSRRLTRKHLGISKLAPAEDLSVSARDLHKISINAQNLKEEKVIKGGEMKKLSNDKLEESMHVKNASQGDIPFSGPLQVSTSSGFAWARRRRDEASIRSHSRSISRGHVINGLDHSAILHSRSNVDSKFHEKGDMLSISCSSSKGRESNERSKVVIRNQWGKFERPDSFDASDEYHSQDFSVALYLQDEMEAKRSNLSYQDQVDKVEYSGPLLSQSSRVDELLDRHERHIRQTVRRSWFQRGTLHFTSMSAFSLDMFAT | 711 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 4527449 | 4531944 | - | Carg21693-RA | Car01g00746 | 141610 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car01g00746 | 711 | MobiDBLite | consensus disorder prediction | 413 | 457 | - | - | |
Car01g00746 | 711 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 247 | 259 | IPR008271 | GO:0004672|GO:0006468 | |
Car01g00746 | 711 | ProSiteProfiles | Protein kinase domain profile. | 127 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car01g00746 | 711 | Pfam | Protein kinase domain | 127 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car01g00746 | 711 | MobiDBLite | consensus disorder prediction | 41 | 57 | - | - | |
Car01g00746 | 711 | MobiDBLite | consensus disorder prediction | 431 | 457 | - | - | |
Car01g00746 | 711 | ProSitePatterns | Protein kinases ATP-binding region signature. | 133 | 156 | IPR017441 | GO:0005524 | |
Car01g00746 | 711 | MobiDBLite | consensus disorder prediction | 23 | 79 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car01g00746 | Car-Chr1:4527449 | Car16g00361 | Car-Chr16:2244419 | 0 | dispersed | |
Car01g00746 | Car-Chr1:4527449 | Car13g00928 | Car-Chr13:9527951 | 3.14E-57 | wgd | |
Car01g00746 | Car-Chr1:4527449 | Car15g00250 | Car-Chr15:1373471 | 0 | wgd | |
Car01g00746 | Car-Chr1:4527449 | Car04g02684 | Car-Chr4:20830013 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
88593 | PF00069 | Pkinase | 7.50E-69 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car01g00746 | - | - | csv:101220347 | 1264.21 |