Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00812 ATGGCCTCCTTGGCAGCCTCCACCGCCGCCGCCTCCCTCGGTGTCTCTGAAATGCTGAGAAATCCCCTCAGCTTCTCCGGCGCCTCCGCCAGGTCAGCGTCCTCTGCTTCTAGCCCGGTCACCTCCAAGATCGTGGCGATTTTCGGGAAGAAGCCAGCCGCCGCTCCCAAGCCCAAGCCCTCCGCTGTCTCTCCAGCCAATGACGAGCTCGCCAAGTGGTATGGTCCCGACAGGAGGATTTTCCTCCCCGACGGGTTATTGGACCGATCCGAGATCCCCGAATACCTGAACGGAGAAGTCCCCGGAGACTACGGTTACGACCCCTTCGGACTCAGCAAGAAACCAGAGGACTTCAGCAAATACCAAGCATTTGAGTTGATCCACGCACGATGGGCCATGCTTGGAGCTGCTGGCTTCATCATCCCCGAGGCCTTCAACAAATTCGGTGCCAACTGCGGCCCTGAGGCTGTCTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCGATCAACCTCATTGTCGCAGTCGCTGCAGAGGTTGTTCTTGTCGGTGGTGCCGAGTACTACAGAATCATCAATGGCTTGAACTTTGAGGACAAGCTCCACCCGGGCGGTCCGTTCGACCCGTTGGGACTGGCAGACGACCCGGACCAGGCGGCAATCTTGAAGGTGAAGGAGATCAAGAATGGAAGACTGGCAATGTTTGCAATGCTGGGGTTTTACTTCCAGGCCTACGTGACCGGAGAAGGGCCGGTGGAGAATTTGGCGAAGCATTTGAGCGATCCTTTTGCAAACAATTTGCTCACAGTCATTTCTGGGAATGCAGAGAGAGTTCCAACTCTTTGA 876 55.37 MASLAASTAAASLGVSEMLRNPLSFSGASARSASSASSPVTSKIVAIFGKKPAAAPKPKPSAVSPANDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVAAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFANNLLTVISGNAERVPTL 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5493122 5494792 + Carg27120-RA Car01g00812 141676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00812 291 Pfam Chlorophyll A-B binding protein 93 254 IPR022796 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00812 Car-Chr1:5493122 Car11g00625 Car-Chr11:3410039 6.40E-39 dispersed
Car01g00812 Car-Chr1:5493122 Car09g01065 Car-Chr9:9490047 2.23E-46 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00812 K08916 - csv:101218137 513.842