Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00824 ATGGACGGCCCCCCTGCGGGCGATATCTGTTCGATCTGCCATGGAAGATTCAACACCCCTTGCCAAGCTAACTGCTCGCACTGGTTCTGCGGAAGGTGCATAATGCTTGTTTGGGATCATGGATCACCACTGCAGCCATGTAAATGCCCCTTATGTCGCCGACAGATCACTTTATTGGTTCCTTCTGAGGCTTCAGCAACGCAGCAAAGTGACCCTGAGGTTGCTCGTGTTCTTAACAATATAAGGAATTATAACCGTCATTTTGGTGGCAACTCAACTGGTTTAAATCAGGACCTTCCTTTTCTCTTACGGAGATTGCTTCGGGAACTCCTCAATCCACAGAGATCTCTTCCTCTTGTCATTAGAGCTCGTGTTTACACTGCAATGTTTCTAAGTGTAGTCTACACAGTGAGTCCCATCGATATCATACCCGAAGCATTACTAGGGTTATTTGGACTGATGGATGATGCCTTTATACTGCTCATCTGCTTCCTTTATGTTGCTGCTTTATACCGATCGGTACTCCATAATCGCCATGGAGGAACTTGA 549 46.45 MDGPPAGDICSICHGRFNTPCQANCSHWFCGRCIMLVWDHGSPLQPCKCPLCRRQITLLVPSEASATQQSDPEVARVLNNIRNYNRHFGGNSTGLNQDLPFLLRRLLRELLNPQRSLPLVIRARVYTAMFLSVVYTVSPIDIIPEALLGLFGLMDDAFILLICFLYVAALYRSVLHNRHGGT 182
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6255715 6262888 - Carg27787-RA Car01g00824 141688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00824 182 Pfam Protein of unknown function (DUF1232) 127 161 IPR010652 -
Car01g00824 182 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Car01g00824 182 ProSiteProfiles Zinc finger RING-type profile. 10 53 IPR001841 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00824 K15707 - cmo:103501307 325.479