Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00890 ATGGGTCGAAAGAAGCCTACTGCACGGGATGATGACAGCGCCCCAGCGGCAGCTCAGGGTGGTGGGAAGTCGAAGAAAAAGACATTTGCAGTAGACGATGATGAGTACTCCATCGGAACCGAGTTGTCTGAAGAAGCCCCAGTTCAGGAGGAGAAGGTCGTGATAACTGGGAAAAAGAAGGGTAAGAAGGGAAATTCAAAAGTTTCACAAGTTAAAGGGGATGATGATGATGATGAGGATGTGGATAGTGTTTCAGAAATTGTTATCACCGGGAAGAAGAAAGGTAAGTCGAAGAAGGGTGGAAGTAGCAGTGCTTTTTCTGCTTCCAGCTTTGGTTTACTTGAGGAGGAGGGAGAGGATGGTGCTGATAATGATGATGAATCTGTGTTAACTGCAGAAAATGATGACGATGAAGGGGATGATTCTGAAATCAAGTTTTCAGGTAAGAAGTCGTCGTCGAAGTCTTCCACGAAGAGTGGTTTTTCTGCAGTGTCAGCATTCAGTGCCCTTGATGACGAGGAAGATGAGGATGTAATTGATAATGAGAACAAAGTTGACGAAGGGATTGATGATGAGCCTGTTATTGCATTTACAGGTAAGAAAAAGTCATCAAAAGGTGCCAAAAAGGGTGTGAATGCATTTTCAGGTTTTAGTGGTCTTGATTATCAGGATGAGGACAGAGATGCTGATAAGGTTGAGGATGAAGATGTTACAACGATTAGCTTCTCTGGTAAGAAAAAGAAGTCAGCTAAGGGTTCAAAGAAAAGTGGCAATTCGGTTAGTGTAGCATTTGCTGATGAGGATAATGATGGCGATGTTTCTATTTCAGAGCCAAATAAATTACAAAATGATGGTGTTGATGAAGACGATGACAATGTTATTGCGTTTTCTGGCAAGAAAAAGTCATCTAAGAAGAAAAGCAGCAGTTCTTTTATCACATTAAGTGATGAAAATCCGCTGGGGAATGATGTTAAAGATGTACCCAAAGTACTTAATTCAGCAAGTACCAGTTTTGCTTCTGACTTATCTAAAGCTAACAAGACGGAGGGGGTAGCAGAAACTTCAAAAAATAAAAAGAAAAAGAAGAAGAGTGGAAGGACTGCTCAAGAAGAAGATGATTTGGATAAGATTCTTGCTGAGCTAGGAGAGGGGCCTACTATATCAAAACTAGCAGACCCTCCTCTTTCTTCACAAGAGGCCAAAGTTGAGAACCCACCTGACCTTGTAACTCCTCCTGATGCATCAGCTGAAAAGGAAGCTGAAGAAGAGAGCACAGAAACGGCTGCAGCTAGGAAGAAGAAAAAGAAAAAGGAGAAGGAAAAGGAGAAAAAGGCTGCAGCTGCAGCGGCAGCAGCTGCTGAAGGGAAGGATGAGAAAATTGAGGAGGTAAAGACTGAAATTATAGAACCCAAAAAAGGTGCTGCAAAGAGTAAAGTGCCAGATAAGAAAGTGCCGAAGCATGTTAGGGAGATGCAAGAGGCTATGGCTAGGAGGAAAGAAGAAGAAGAGAGAAGGAAAAGGGAAGAGGAAGAGAAATTGAGGAAGGAGGAAGAAGAGAGACGGAGGCAAGAAGAACTTGAAAGGCAAGCTGAGGAGGCTAAGCGTAGGAAAAAGGAAAGAGAAAAAGAGAAGCTCCTAAAGAAGAAACAAGAAGGCAAGCTGTTAACAGGGAAACAAAAGGAAGAACAACGGAGGTTGGAGGCAATGAGGAACCAGATATTAGCAAGTTCAGGGGGTTTGCCACTGTCTGCATCTGACCCTAGTGCACCAACCAAACGACCAAAATACCAGACAAAGAAGTCAAAACCTGCCCATCATCAAACAAATGGTAGTGCGCAAACTAAGGTGATGGAACATACAGAAGAAAAGATACAAGAAAAAGATGTGGCAGATTCTGAAATATTGGAGTCTGAGAAGATTGAACCTGTTGAGTCGATGCACGTGGAGGAAAAATCGGATATTATTGAGGTTTCTGAAGATAATGAAATTAAAAAAGAGGACGAGGATGAGGATGAGGATGAGTGGGATGCAAAGAGTTGGGATGATGCTGTTGTTGATCTTTCCTTAAAAAGTTCCTTTGCTGATGAGGAGCTTGATTCAGAGACTGAGAATGGCATGAAAAAGGATGGAAAGAATGGTGCACAAACTTCACGTGATGCAGGTGCCAAGCCAATTGCCCCTGCCCAAAAAAGTTTACCTTCTCAGCCTATAAGGTCTCAAGATATTGAAAACAGAAAGAATCAGCCTGAGGTTGAGGTTGTTGACAAGGGCAAACGAAAAGATGATGCTGTTAAGAAAAAAATTTCAACATCAGATACTACTACTAAACAACAGGAAGAAAATCTTCGCTCACCCATTTGTTGTATTATGGGCCACGTTGACACTGGTAAAACCAAACTACTGGACTGTATTCGTGGTACAAATGTTCAAGAGGGAGAGGCAGGAGGAATTACGCAGCAGATTGGGGCAACATATTTTCCTGCTGAGAACATTCGTGAAAGAACTAGGGAATTGAAAGCTGATGCAAAGCTGATGGTTCCTGGCTTGCTTGTTATTGATACCCCTGGGCACGAATCATTTACAAATTTGCGTTCTCGTGGTTCGGGTTTATGTGACCTTGCAATTTTGGTTGTTGACATCATGCATGGCTTAGAGCCACAAACAATAGAATCTCTAAATCTCTTGAGGATGAGAAACACAGAATTTATTATTGCTCTGAATAAGAAAAGTTATGCAACTTTCCAGGTTGACAGACTTTATGGGTGGAAAACAATCCGCAATGCACCAATACTGAAGACAATGAAGCAGCAATCCAAGGATGTGCAGAATGAGTTCAATATGAGGCTTATTCAGATTATCACTCAATTTAAAGAGCAAGGATTGAATACCGAGCTGTATTATAAAAATAAAGAAATGGGGGAGACTTTCAGTATAGTACCTACAAGTGCTGTTACTGGTGAAGGTATTCCAGACTTGTTATTATTATTGGTTCAGTGGGCCCAGAAAACCATGACGAAGAAACTTACATATAGTGATGAAGTGCAGTGTACGGTCTTGGAGGTCAAGGTTGTTGAAGGCCATGGAACAACTATTGATGTCATATTGGTTAACGGTGTACTGCATGAAGGAGATCAAATAGTTGGCCCAATTGTTACTACTATTCGAGCCCTATTGACCCCCCATCCAATGAAGGAGCTCCGAGTGAAGGGAACGTATCTGCATCATAAAGAAATCAAGGCTGCTCAGGGAATTAAAATAACTGGACAGGGTCTTGAGCATGCCATTGCTGGAACCAGTCTTCATGTGGTAGGTCCTGAGGATGACTTGGAAGACATTAAGGATTCAGCTATGGAAGATATGAAGTCAGTAATGAGCAGGATAGACAAGACTGGTGAGGGAGTCTGTGTTCAAGCATCTACACTTGGTTCCTTGGAAGCATTGTTGGAGTTTTTGAAGAGTCCGGCTGTGAGCATTCCTGTTAGTGGAATAAGTATAGGACCCGTTCATAAAAAAGATGTCATGAAAGCTAGCGTAATGCTTGAAAAGAAAAAGGAATATGCCACTATTTTGGCTTTTGATGTTAAAGTGACTCCAGAAGCTCGAGAACTTGCTGATGAGCTTGGTGTGAAGATTTTTATTGCTGATATCATCTATCACTTGTTCGACCAGTTCAAGGCCTACATTGATAATCTTAAAGAGGAAAAGAAGAAAGAAGCTGCTGAGGAAGCAGTCTTTCCTTGTGTTCTCAAGATTTTACCTAACTGCATTTTCAACAAGAAGGATCCAATTGTGTTGGGGGTTGATGTAATTGATGGCATTGCCAAGGTTGGCACACCAATCTGTATTCCTCAACGAGAATTTATTGAGATTGGTCGCATCGCATCTATTGAAAATAATCACAAACCTGTTGATTATGCAAAGAAGGGGCAGAAGATTGCCATTAAGATTGTTGGGCACTCTTCGGAGGAGCAGCAAAAGATGTATGGTAGGCATTTTGATTTGGAGGATGAACTTGTCAGTCATATATCAAGGAAGTCCATTGACCTACTCAAAGCCAATTATCGGGATGATTTGTCCACGGAGGAGTGGAGACTGGTGAGGCAGAGGCCATGTGGTAGGGAAGGAAGGCTGTTCCTTGAAAAAGCCACCTGTGCCGAGTTTATGGGAAGGATGAACGTTGAATTCTTCATGAAGGTGGGGAAGGTGGAGGGTTTGAAACTCCGAAAGGAAATATGTGTTTCTTGTTAG 4248 42.04 MGRKKPTARDDDSAPAAAQGGGKSKKKTFAVDDDEYSIGTELSEEAPVQEEKVVITGKKKGKKGNSKVSQVKGDDDDDEDVDSVSEIVITGKKKGKSKKGGSSSAFSASSFGLLEEEGEDGADNDDESVLTAENDDDEGDDSEIKFSGKKSSSKSSTKSGFSAVSAFSALDDEEDEDVIDNENKVDEGIDDEPVIAFTGKKKSSKGAKKGVNAFSGFSGLDYQDEDRDADKVEDEDVTTISFSGKKKKSAKGSKKSGNSVSVAFADEDNDGDVSISEPNKLQNDGVDEDDDNVIAFSGKKKSSKKKSSSSFITLSDENPLGNDVKDVPKVLNSASTSFASDLSKANKTEGVAETSKNKKKKKKSGRTAQEEDDLDKILAELGEGPTISKLADPPLSSQEAKVENPPDLVTPPDASAEKEAEEESTETAAARKKKKKKEKEKEKKAAAAAAAAAEGKDEKIEEVKTEIIEPKKGAAKSKVPDKKVPKHVREMQEAMARRKEEEERRKREEEEKLRKEEEERRRQEELERQAEEAKRRKKEREKEKLLKKKQEGKLLTGKQKEEQRRLEAMRNQILASSGGLPLSASDPSAPTKRPKYQTKKSKPAHHQTNGSAQTKVMEHTEEKIQEKDVADSEILESEKIEPVESMHVEEKSDIIEVSEDNEIKKEDEDEDEDEWDAKSWDDAVVDLSLKSSFADEELDSETENGMKKDGKNGAQTSRDAGAKPIAPAQKSLPSQPIRSQDIENRKNQPEVEVVDKGKRKDDAVKKKISTSDTTTKQQEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTRELKADAKLMVPGLLVIDTPGHESFTNLRSRGSGLCDLAILVVDIMHGLEPQTIESLNLLRMRNTEFIIALNKKSYATFQVDRLYGWKTIRNAPILKTMKQQSKDVQNEFNMRLIQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAVTGEGIPDLLLLLVQWAQKTMTKKLTYSDEVQCTVLEVKVVEGHGTTIDVILVNGVLHEGDQIVGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAQGIKITGQGLEHAIAGTSLHVVGPEDDLEDIKDSAMEDMKSVMSRIDKTGEGVCVQASTLGSLEALLEFLKSPAVSIPVSGISIGPVHKKDVMKASVMLEKKKEYATILAFDVKVTPEARELADELGVKIFIADIIYHLFDQFKAYIDNLKEEKKKEAAEEAVFPCVLKILPNCIFNKKDPIVLGVDVIDGIAKVGTPICIPQREFIEIGRIASIENNHKPVDYAKKGQKIAIKIVGHSSEEQQKMYGRHFDLEDELVSHISRKSIDLLKANYRDDLSTEEWRLVRQRPCGREGRLFLEKATCAEFMGRMNVEFFMKVGKVEGLKLRKEICVSC 1415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8238093 8253745 - Carg27666-RA Car01g00890 141754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00890 1415 Coils Coil 484 551 - -
Car01g00890 1415 MobiDBLite consensus disorder prediction 329 350 - -
Car01g00890 1415 MobiDBLite consensus disorder prediction 743 773 - -
Car01g00890 1415 Pfam Translation-initiation factor 2 1113 1225 IPR023115 -
Car01g00890 1415 Pfam Elongation factor Tu GTP binding domain 786 1001 IPR000795 GO:0003924|GO:0005525
Car01g00890 1415 Coils Coil 420 456 - -
Car01g00890 1415 MobiDBLite consensus disorder prediction 1 779 - -
Car01g00890 1415 MobiDBLite consensus disorder prediction 662 679 - -
Car01g00890 1415 Coils Coil 1221 1241 - -
Car01g00890 1415 MobiDBLite consensus disorder prediction 149 164 - -
Car01g00890 1415 MobiDBLite consensus disorder prediction 414 433 - -
Car01g00890 1415 MobiDBLite consensus disorder prediction 364 379 - -
Car01g00890 1415 MobiDBLite consensus disorder prediction 282 298 - -
Car01g00890 1415 MobiDBLite consensus disorder prediction 576 594 - -
Car01g00890 1415 MobiDBLite consensus disorder prediction 616 661 - -
Car01g00890 1415 Pfam Elongation factor Tu domain 2 1028 1100 IPR004161 GO:0005525
Car01g00890 1415 MobiDBLite consensus disorder prediction 169 187 - -
Car01g00890 1415 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 782 1005 IPR000795 GO:0003924|GO:0005525
Car01g00890 1415 MobiDBLite consensus disorder prediction 454 568 - -
Car01g00890 1415 MobiDBLite consensus disorder prediction 116 141 - -
Car01g00890 1415 MobiDBLite consensus disorder prediction 692 714 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00890 Car-Chr1:8238093 Car01g01154 Car-Chr1:10644827 2.12E-24 dispersed
Car01g00890 Car-Chr1:8238093 Car09g00978 Car-Chr9:6216569 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00890 K03243 - zju:107427478 1468.75