Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00899 ATGCCGTCTTCCGGTGTTTCAGCCTTGGATTCAGAAGAAGAAGGCAGGTCGAATGTGGGTAAAACAAAGGAGAACCCCAGCTTCTTCGATATATATGGAACCGATGCCAAAGCTGAGATTCTTTTCAAAACTCCTGAGTCTAATTCAACTTTAAGTCTGCAAGATGTTCAAGGGCTTGTAACTTGGGTGCTTGCTGAGGGTTTCATGCCATCATGGGTTTTCATTAAGAATAAACCCCTGATCCCCAAAGTGGTTATGGTTTATCTCCCTGGCCTGGATGCTGCTCTGTACATGTCACAGACCAAGATACTTCCTACGTTTAAAAAATTATGCGGCAATCCGAGGGCAGTTTTAGCTCTTAGCTGTATATCAGATAGAATGCAAACAATTGATGCACTTTTGACATGTAAGGTAAAGAGAAAGAGGGATGCAAATAGTGTAGACTTAAAGAATAATTTGACGTCTGAACAAGAAAGACTTGGCCCTGAAAAAGAAACACCGATATCTATCAAACTCCCGAAGGAGTTACCTTTCCCTGTTACATATTATACGCTAACTGCAAAAGAACTGGAAGACAATGGCTATCCTTTCAATCAACCAGGTTTTATACATACACTTCCTGCTCCTATTGGATCTTCACCTTATGAAATGTTGGCGCTTGACTGTGAAATGTGTGTGACCTGTGAAGGGTTTGAGCTCACAAGAATAACCCTGGTGGATATGGAAGGACAGGTTGTCCTTGACAAATTGGTAAAACCATCAAATGCAATTGTTGATTACAATACGAGGTTTAGTGGAATTACATTTGAGATGTTACGTCAGGTGACCACTAGTCTGGAAGATGTTCAGAAAGTTTTTTTGAATCTAGTTCACAAGGAGACCGTTCTAATTGGTCATTCACTGGAGAATGACCTGATGGCATTAAAGATCTCTCATGATCTGGTGATTGATACTGCAGTACTGTATAAGCATCCCCGTGGCGGCTCTCATAAATCTGCCCTTCGAATCCTTACCAAAAAATTTCTTTCCAGGGAGATACAACAATCTGGCAATGGCCATGATAGTATTGAAGATGCAAGAGCTACTATGGAACTTGCACTTCTTAAAATTAAACATGGTAAGTGA 1125 40.8 MPSSGVSALDSEEEGRSNVGKTKENPSFFDIYGTDAKAEILFKTPESNSTLSLQDVQGLVTWVLAEGFMPSWVFIKNKPLIPKVVMVYLPGLDAALYMSQTKILPTFKKLCGNPRAVLALSCISDRMQTIDALLTCKVKRKRDANSVDLKNNLTSEQERLGPEKETPISIKLPKELPFPVTYYTLTAKELEDNGYPFNQPGFIHTLPAPIGSSPYEMLALDCEMCVTCEGFELTRITLVDMEGQVVLDKLVKPSNAIVDYNTRFSGITFEMLRQVTTSLEDVQKVFLNLVHKETVLIGHSLENDLMALKISHDLVIDTAVLYKHPRGGSHKSALRILTKKFLSREIQQSGNGHDSIEDARATMELALLKIKHGK 374
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8484120 8490730 - Carg26864-RA Car01g00899 141763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00899 374 Pfam Exonuclease 219 365 IPR013520 -
Car01g00899 374 MobiDBLite consensus disorder prediction 1 22 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00899 Car05g00808 CCT
Car01g00899 Car09g00086 CCT
Car01g00899 Car09g00086 ECH
Car01g00899 Car05g00808 ECH
Car01g00899 Car12g00381 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00899 Car-Chr1:8484120 Car03g00862 Car-Chr3:6932034 9.85E-32 dispersed
Car01g00899 Car-Chr1:8484120 Car09g00971 Car-Chr9:6099569 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00899 K14570 - csv:101215617 667.151