Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00900 ATGAAGAAAATTGAATTAGATCGAATAGAATCTGATCGGTTTTTCTTGTCATCTTCCATTCAAATCTCGGCGGTTTTTCGAATTCGAAACTCTCTGGTCAAGTATCACTTGCAGAAGATGGTGCCTTCGGGGCCATCCACTCCCATTGGTGGTGCGCAGTCTGTTTCACCATCGCTTTTGAGATCAAATTCTGGAATGATGGGAGCACAAGGGGGGCTGCCTTCTCAGTCAGCTTTTCCTTCTCTTGTATCTCCACGAACTCAGTTTAGTAGTATGAATATGCTTGGTAATATGCCCAGTATGTCTTCTCTCCTTAATCAGTCATTTGGGAATGGAGTTCCAAATTCTGGGCCCTCAGGTCTTGGAAACAGCCAACGAGGAAGTATGGACCCTGGTTCCGAGTCAGATCCATTTTCACTTGTTGGCAATGGTGTGAACTTCAATAATACGCCATCATCATTAGGGGCATCAAATACAGGAAACCCTGCTTCATCCAGTCAAGTTTCAGGGCCACAATTTTCAAACCATTCTAGCAGCCAAATAATACCCAATCAACAGCAGCCCCAGCAAATTGAGCCCCAGAACTTCCAACCTAGTCAGCATTCAATGCAGCAGTTCGTTAGCTCTAATAATGCACAGCAGTCACAGCAGCAGCAGCAACAACAACAACATCAATTCCAACCTATACGAGGAAGCTTATGTGGTGTTGGACCTGTCAAGTTAGAGTCTCAAATGAATAATAATGATATTCAGGGGCAGCAACTACAGCAGCAGCAGCAGCAGCTGCAGTCAATGAGGAACCTTGGTCCTGTGAAACTGGAACCTCAACAACTTCAATCAATGAGAAACTTGGGTCCTGTGAAATTGGAACCTCAACAGTCTGATCAGTCATTGTTTCTACAGCAGCAACATCAACATCAACAGCAGCAACAACAACAGCAGTTGCTCAGTTTGTCTAGGCAGTCCTCTCAGGCTGCTGCTGCTGCGCAGATTAATCTTTTGCAACAACAAAGGCTCTTGCAATTTCAACACCAACAGCAACTCCTGAAGGCTATTCCTCAGCAAAGACCGCATTTGCCTCAACAATTTCAACAACAAAATTTGCCATTGAGATCCCCTGTAAAACCAGTTTATGAACCTGGCATGTGTGCTCGGCGTTTAACAAATTATATGTGTCAACAGCAGCAGAGACCTGAAGACAACAATATTGCATTCTGGAGGAAATTTGTTGCGGATTACTTTGCTCCACATGCCAAAAAGAAATGGTGCGTCTCCATGTATGGAAATGGACGCCAAACAACTGGTGTATTTCCACAGGATGTTTGGCATTGTGAAATATGCAACCGCAAGCCTGGTCGAGGTTTTGAAGCAACCTTTGAAGTTCTTCCAAGGCTGTTCAAAATCAAATATGAAAGTGGAACTCTTGAAGAACTTCTCTATATTGATATGCCCCGCGAATATCATAATTCCTCTGGACAAATTGTCCTAGATTATGCCAAAGCAATACAAGAAAGCGTGTTTGAGCAACTTCGCGTTGTTCGTGATGGCCAACTTCGGATAGTTTTTTCTCCAGACTTAAAGATATGTTCTTGGGAATTTTGTGTTCGACGTCATGAAGAGCTTATTCCTCGAAGGTTACTAATACCTCAGGTTAGTCAGCTGGGGGCAGCTGCTCAGAAGTATCAGACTGCTATTCAAAAGGCATCATCTAACTTGTCTACTCCCGAGTTGCAAAATAACTGTAACATGTTTGTGGGCTCAGCTAGACAATTGGCCAAGGCATTGGAAGTGCCATTAGTAAATGACTTGGGATATACGAAGAGATATGTCCGGTGCCTTCAGATATCAGAAGTCGTCAATAGTATGAAGGACTTGATAGATTACAGTCAAGAAACTTCGACAGGGCCAATTGAGAGTTTGGCCAAGTTTCCACGGAAGACAAATGCTTCACCAGGATTCCTCAGCCAAGCTCAAAACACTGAGCAACAATTACCTCAACCCCAGCAAACAATTGATCAAAACACAAACGGCGACCAAAGCTCTGTTCCGGCTGCTGCTAACAATGGTGCTCCAAATGCAAATAACCCCGCGAATCCAGCATCAACATCATCTCCTGCTAGTACCATTGTTGGATTACTTCACCAGAATTCCATGAACTCTAGACAGCAGAACTCTATCAACAGTGCTGGAAGCCCTTATGCCGGGAACTCTGTGCAAATATCATCCCCAGGTTCCTCCACCACGATTGCTCAGGCACAAGCGAATCCCTCCTTCCATTCGCCTACATTGTCCTCATCTAACAATCCTCCGCAATCATCAATTGGAACTGCAACTACTAATCACGTAAGTGCCACAAACTCTCCGGTAAATGTTCCCCTGCAACAGCCAACACACTCCTCTGAAGCCGATCAATCCGATTCCCAGAGCTCCATGCAAAAGATTATTCAGGAATACATGATGTCAAACCAACTAAACGGGATGAACACAATGGCTGGTGTTTCCTCTCTAGCAGAGGATGTGAAACCTGTTAATGGGATGTTGGCAGCAAACAATATTATGAGTCTCAATGGACGGAACTGCCTGGTCGGGAGTGGAACTGCCAATGGTGTTTCTGGTATCAGGAGCATGGGGTATGGCTCGATGGGTGGTGGAGGACTTGCTCAGGCTTCTATGGTCAATGGAATGAAGTCTGCAATGGGAAGTAACTCGATTTCAAATGGGAGAATCGGGATGGCGTCATTGGCTCGAGAACAGAGCATAAATCATCAAGATTTGGGAGACCAGCTCCTTAATGGTCTGGGAGCAGTGAATGGGTTTAATAATCTTCAATTTGATTACTGA 2841 44.56 MKKIELDRIESDRFFLSSSIQISAVFRIRNSLVKYHLQKMVPSGPSTPIGGAQSVSPSLLRSNSGMMGAQGGLPSQSAFPSLVSPRTQFSSMNMLGNMPSMSSLLNQSFGNGVPNSGPSGLGNSQRGSMDPGSESDPFSLVGNGVNFNNTPSSLGASNTGNPASSSQVSGPQFSNHSSSQIIPNQQQPQQIEPQNFQPSQHSMQQFVSSNNAQQSQQQQQQQQHQFQPIRGSLCGVGPVKLESQMNNNDIQGQQLQQQQQQLQSMRNLGPVKLEPQQLQSMRNLGPVKLEPQQSDQSLFLQQQHQHQQQQQQQQLLSLSRQSSQAAAAAQINLLQQQRLLQFQHQQQLLKAIPQQRPHLPQQFQQQNLPLRSPVKPVYEPGMCARRLTNYMCQQQQRPEDNNIAFWRKFVADYFAPHAKKKWCVSMYGNGRQTTGVFPQDVWHCEICNRKPGRGFEATFEVLPRLFKIKYESGTLEELLYIDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCVRRHEELIPRRLLIPQVSQLGAAAQKYQTAIQKASSNLSTPELQNNCNMFVGSARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSQETSTGPIESLAKFPRKTNASPGFLSQAQNTEQQLPQPQQTIDQNTNGDQSSVPAAANNGAPNANNPANPASTSSPASTIVGLLHQNSMNSRQQNSINSAGSPYAGNSVQISSPGSSTTIAQAQANPSFHSPTLSSSNNPPQSSIGTATTNHVSATNSPVNVPLQQPTHSSEADQSDSQSSMQKIIQEYMMSNQLNGMNTMAGVSSLAEDVKPVNGMLAANNIMSLNGRNCLVGSGTANGVSGIRSMGYGSMGGGGLAQASMVNGMKSAMGSNSISNGRIGMASLAREQSINHQDLGDQLLNGLGAVNGFNNLQFDY 946
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8492680 8505614 - Carg26865-RA Car01g00900 141764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00900 946 MobiDBLite consensus disorder prediction 637 706 - -
Car01g00900 946 MobiDBLite consensus disorder prediction 103 132 - -
Car01g00900 946 MobiDBLite consensus disorder prediction 139 226 - -
Car01g00900 946 MobiDBLite consensus disorder prediction 718 810 - -
Car01g00900 946 MobiDBLite consensus disorder prediction 103 226 - -
Car01g00900 946 MobiDBLite consensus disorder prediction 649 706 - -
Car01g00900 946 Pfam LIM-domain binding protein 386 640 IPR029005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00900 Car-Chr1:8492680 Car15g01273 Car-Chr15:9945714 2.80E-115 dispersed
Car01g00900 Car-Chr1:8492680 Car15g00580 Car-Chr15:3208516 0 wgd
Car01g00900 Car-Chr1:8492680 Car04g02333 Car-Chr4:18779618 0 wgd
Car01g00900 Car-Chr1:8492680 Car09g00969 Car-Chr9:6082539 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00900 - - csv:101221714 1325.84