Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00937 ATGATTCATTCTGGTTTCTTCCTTGCGGGTCCTTCATTTAATTCTGATGCTACTACATCTTTCATATCGAGTACTGTGTCTGGAGAAGATGGCGCTACGGCTGATGATACCAGAAATGATACCTCTGGTTCCCTCCCTCCTTCTTTTTGGGTTAGAACGGCCATGAGAGTCTCTAGAGCTAGATGGTTCATTTTCTTGAGAAGAGTTTTTCATTACCAAAACGGATCGAGATCTGATCTTGGGCCGAATCCTTTCAATTCAGGTTCATGGATGGCGATGGAACTTGTAGCTTTGTTATTTCAACTAATCATCTCTGTGTTCACTCTTGCCATTTCACAAACTGAGAAGCCAGTTTGGCCTATGAGATTGTGGATAGCTGGTTATGATCTTGGCTGTGTTCTTAGCTTACTGCTTCTCTGCGGTCGCCATCAGTGTCGTTATCTTATGCAGGGAGATAGTAACAGTCTTTCGGATATCGAGCACCAGAGCAGCAATGAATCATCGAGGTACTCACATTTGATCAACAGATGTCGGACGTTTCTTGATCTTTTCTTTGCAATATGGTTCGTAATGGGCAATCTTTGGATCTTCGATTCTCGGTTTGCGTCGTTTCAAGGAGCTCCCAAGCTACATCTATTATGCAGCTTCGTGCTAGTTTGGAATGCCATATGCTACTCTTTCCCATTCTTCCTGTTTCTGCTGCTATGTTGCTGTGTGCCAGTGATCAGTAGTCTTATAGGATATAACATCAACATGGGATCAACCGAAAAAGGCGCATTGGACGATCAAATCTCTCAACTACCTTGCTGGAAATACAAAGTCGTCGACGTCAACATCAACCTCGGAATTCAACCCGATAATTCCAATACAGGACTCCCAAAAGAGGATCCAGAATGTTGCATCTGTCTTGCCAAGTATATAGACAAGGAAGACGTGAGACAGTTGCCTTGTTCTCATGTGTTCCATCTCAGGTGCGTAGATAAATGGCTTGCTATAGCATCATCATGCCCTCTCTGTAAGCAACAACTTCAAAGATAG 1038 43.35 MIHSGFFLAGPSFNSDATTSFISSTVSGEDGATADDTRNDTSGSLPPSFWVRTAMRVSRARWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISVFTLAISQTEKPVWPMRLWIAGYDLGCVLSLLLLCGRHQCRYLMQGDSNSLSDIEHQSSNESSRYSHLINRCRTFLDLFFAIWFVMGNLWIFDSRFASFQGAPKLHLLCSFVLVWNAICYSFPFFLFLLLCCCVPVISSLIGYNINMGSTEKGALDDQISQLPCWKYKVVDVNINLGIQPDNSNTGLPKEDPECCICLAKYIDKEDVRQLPCSHVFHLRCVDKWLAIASSCPLCKQQLQR 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9049200 9052258 - Carg23343-RA Car01g00937 141801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00937 345 Pfam Ring finger domain 298 340 IPR001841 -
Car01g00937 345 ProSiteProfiles Zinc finger RING-type profile. 299 340 IPR001841 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00937 Car16g00969 CCT
Car01g00937 Car09g00929 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00937 Car-Chr1:9049200 Car12g00287 Car-Chr12:1879624 3.30E-52 dispersed
Car01g00937 Car-Chr1:9049200 Car09g00929 Car-Chr9:5723236 5.92E-147 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00937 - - csv:101217150 598.971