Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00954 ATGGCCAGCAAAGAAGTGATAGAGCCGCTGTTACCAACGTCGTCTAATACTATTGGAACAAGAATATTAGATATTCCCAGTAGCAAAAGACGATTGAGGCGCACTAAGAGTGCTCCTCATGCGGATTCACCTCAATCAGAGACCACCGGCGCAGGCACAGGCACAGGCACCGGCGCAGACACTTGTCCAGTTCCACGTTCAGGATTAATTTTTGGAAATCTTGGTCCGAGTTTAAGAAGAGTAGCCTTAGTTTTAATACTATACATGGGTATAGGAACTCTATGTTTTTATCTTGTCAGGTACCAAATCAAAGGGGAAAAAACAAACGGAATAGTTGATGCCATTTATTTCACTATTGTGACAATGACAACCGTTGGATATGGAGATCTTGTCCCAAGCAGTCCTTCAACAAAACTACTAGCTTGCGCTTTTGTCTTCTCGGGAATGGCCCTCGTTGGCCTAATACTAAGCAGTGCAGCCGATTATTTGGTAGAGAAGCAGGAAATCTTGCTATTTAAGACATTGAATGCGCACCAAAACGGCCATTGTGACATGACAAAAGAAATTGATACTGATAAAGCCAGAAACAAGTGTATAGTGGTGTTTCTCTTGCTTATTTTGTTCATCATTTCTGGGACTGTCTTTCTTGTTAACATTGAGAAGTTGGGTTTCATTGATGCCTTTTATTGTGTATGTTCTACCATCACTACATTAGGCTATGGAGACAAAAGCTTCTCGACTAAGTCGGGGCGCATCTTCGCCATTTTCTGGATCTTGATAAGTACCATCACACTGGCTCAGTTTTTCCTCTACATTGCTGAGCTAAACACTGAAAGAAGGCAGAAGTCTCTGGTGAAGTGGGTTCTGAGTAAAAAGGTGACGAACTTGGATCTTGAGGCTGCGGATCTCGATAACGACAGGGTCGTCGGGGCTGCAGAATTTGTGATCCACAAGCTGAAAGAGATGGGGAAAATCACAGAAGATGACATTGCACCTGTGCTGAAGGAATTTGAGAAGCTTGATGTTGATCAGTCAGGAACGCTGTCCACATCTGATTTAACACTTGCTCAATCGTCTTAA 1080 43.06 MASKEVIEPLLPTSSNTIGTRILDIPSSKRRLRRTKSAPHADSPQSETTGAGTGTGTGADTCPVPRSGLIFGNLGPSLRRVALVLILYMGIGTLCFYLVRYQIKGEKTNGIVDAIYFTIVTMTTVGYGDLVPSSPSTKLLACAFVFSGMALVGLILSSAADYLVEKQEILLFKTLNAHQNGHCDMTKEIDTDKARNKCIVVFLLLILFIISGTVFLVNIEKLGFIDAFYCVCSTITTLGYGDKSFSTKSGRIFAIFWILISTITLAQFFLYIAELNTERRQKSLVKWVLSKKVTNLDLEAADLDNDRVVGAAEFVIHKLKEMGKITEDDIAPVLKEFEKLDVDQSGTLSTSDLTLAQSS 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9161999 9165350 - Carg22409-RA Car01g00954 141818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00954 359 MobiDBLite consensus disorder prediction 29 60 - -
Car01g00954 359 Pfam Ion channel 204 275 IPR013099 -
Car01g00954 359 Pfam Ion channel 84 164 IPR013099 -
Car01g00954 359 ProSitePatterns EF-hand calcium-binding domain. 341 353 IPR018247 -
Car01g00954 359 MobiDBLite consensus disorder prediction 39 56 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00954 Car09g00916 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00954 Car-Chr1:9161999 Car07g00111 Car-Chr7:713617 9.21E-67 dispersed
Car18g00550 Car-Chr18:5182713 Car01g00954 Car-Chr1:9161999 8.44E-117 transposed
Car01g00954 Car-Chr1:9161999 Car09g00916 Car-Chr9:5642024 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00954 K05389 - csv:101216032 551.977