Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00972 ATGTGTTCCTCTTCTCGCACTTTCCTTTTGCTGTTTCCTCTGCTTCTTCACTCGTTCGTGGCGCTGGTCTCTGCTCAGGGTTCTAATAATACCTCTCCATGGCAGACTCTGAGTGGAAATCCTCCATTCGTTGTGGCTCGCGGTGGATTTTCAGGGCTTTTTCCTGATTCGAGCGGAATCGCCTACAATTTTACACTGATGGTTAGTGTACCTGATGTGATCTTATGGTGTGATGTGCAATTAACTAAAGATGAAGTCGGAATTTGTCTCCCGGATCTGAGGCTCAACAATGCTACTAACGGTGCGAACGTTCTGGCGAAAAACCGCAGCAGTGTCTATGTTGTTAATGGAGTTCATACGGAAGGATTGTTCACAGTCGATTTCAATTCTAAAGATCTGGAAAATGTTACTCTTACTCAAGGAATCTACTCTCGACCTGACAATTTTGATGGCAATGGTTTTGCTATTCTCGGTCCTGAAGACGTGTATGAGCAGTTGCAACCACCAGGACTTTGGCTGAATATTCAGCATGATGCATTCTACACTCAACGAAACTTGAGCATGAGGAACTTCGTACTTTCTGTAACGAAACGCATCACTGTTAACTACATATCATCACCAGAGGTGGGATTTCTTAAAAGCATATCTTCAAGAATCAATCCCCACAAAACGAAGTTGATCCTTCGGGCATTAGGACCAGATACTATTGAGGTTACCACCAATCAAACATACGCCTCTCTCCTACGCAACCTCACTTTTATCAAGACATTTGCCTCTGGAATTCTTGTTCCCAAGACCTATATACGGCCCATTGATGGCGATGGCTACCTACAACCTGAAACCTCTCTTGTTTCTGATGCTCATAAAGCAGAGCTGGAAGTTTTTGCTTCAGAGTTCTATAATGACCTTCCACTGAGCTACAACTACAGCTATGATCCTATTACCGAGTACCTGTCGTACTTCGACGGTGGCAGATTTTCAGTTGATGGTGTGCTCACTGATTTCCCTATTAGTCCATCCGCAGCTATTGATTGTTTTACTCATTTGGATGATAAGGCAAAAAGTCAAGCCAAGCCTTTGGTTATTTCCAAATTTGGAGCCAGTGGAGACTTTCCTGCTTGCACAGACTTGGCGTATTCCAAGGCTATATCAGATGGTGTAGAAGTGCTCGACTGTCCTGTTCAAATGACAAAAGATGGGACACCATTTTGCATGAGCTCAATCAATCTTATTTACAGCACAAAAATATCTCAAACACCATTCATTAATCGTTCAAAAACAATTCCCGCCATTAGTTCTGAGAATGGAATCTTTGCTTTTGACTTAACATGGGAAGAGATTCAAGGCCTCACCCCTTCAATATCGAACCCTTTTTCAAATTTCACGTTGTTTCGAAACCCGAGGTTCCGAAACAGTGGGAAATTCTTAACGCTACCAGATTTCTTGGCCTTGGCAAAGAATGGGAGCTCTCTTTCCGGTGTCTTGATCCATATTGAGAATGCAGACTACCTTGCCAAGGAACAGGGTTTAAGTGTAATCGATGCGGTCTCTGATTCCTTGAGCAAAGCTGGTTATGATAATCAGACAGCCCTGAAAGTATTGATTCAGTCTCCAAATAGCCCTGTTCTTATAAAATTCAAAGAGGAAAAGAAAAATTACGAGCTTGTTTATGAAGTCGATATGTCAATTAGTGATGTGCTTAATGAAACTGTCGTGGACATCAAGAGTTTTGCCGATTCTGTCACTATCACCAAGGACTCAGTCTTTCCTGAAAACCAGCAATTTCTCACTGGATCTACAAATGTTGTGACGAAGCTGCAATCACTTAATCTGTCTGTATATGTGGAAACCTTCAGCGATGAATTTGTCTCTCAAGCATGGGATTTCTTCTCTGATGCAACAGTAGAGATCAACTCATATGCTATGGGAGCCGGGATTGATGGAATCATCACCGATTTTCCGAAGACATCTGCTAGATATAAAAAGAACAGATGCTTAACAATGAAAGAGCTACCTAACTACATGATCCCTGTCCAGCCTGGTAGCTTGTTGCAACTCGTTACAGAGGCGTACTTGCCTCCAAAGAAAGCTCCAAGCCCGGTTCTGGGTGACAAAGACATAGCTGAGCCACCATTGTCTCCAGTCTCGAGCAAAGCCCCACCACCTGCTGGGGAAGGTGGCTCCGCCGCATCACCTCCAGCTCCTTCACGTAATGGACAACCTAAGCTTGGAGCTGGGGCAGGCTTCTTGCTCCTCAACCTTGCCATACTTTGCATAGTTATTCTTCCATTCTGA 2295 43.62 MCSSSRTFLLLFPLLLHSFVALVSAQGSNNTSPWQTLSGNPPFVVARGGFSGLFPDSSGIAYNFTLMVSVPDVILWCDVQLTKDEVGICLPDLRLNNATNGANVLAKNRSSVYVVNGVHTEGLFTVDFNSKDLENVTLTQGIYSRPDNFDGNGFAILGPEDVYEQLQPPGLWLNIQHDAFYTQRNLSMRNFVLSVTKRITVNYISSPEVGFLKSISSRINPHKTKLILRALGPDTIEVTTNQTYASLLRNLTFIKTFASGILVPKTYIRPIDGDGYLQPETSLVSDAHKAELEVFASEFYNDLPLSYNYSYDPITEYLSYFDGGRFSVDGVLTDFPISPSAAIDCFTHLDDKAKSQAKPLVISKFGASGDFPACTDLAYSKAISDGVEVLDCPVQMTKDGTPFCMSSINLIYSTKISQTPFINRSKTIPAISSENGIFAFDLTWEEIQGLTPSISNPFSNFTLFRNPRFRNSGKFLTLPDFLALAKNGSSLSGVLIHIENADYLAKEQGLSVIDAVSDSLSKAGYDNQTALKVLIQSPNSPVLIKFKEEKKNYELVYEVDMSISDVLNETVVDIKSFADSVTITKDSVFPENQQFLTGSTNVVTKLQSLNLSVYVETFSDEFVSQAWDFFSDATVEINSYAMGAGIDGIITDFPKTSARYKKNRCLTMKELPNYMIPVQPGSLLQLVTEAYLPPKKAPSPVLGDKDIAEPPLSPVSSKAPPPAGEGGSAASPPAPSRNGQPKLGAGAGFLLLNLAILCIVILPF 764
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9265160 9271949 - Carg22390-RA Car01g00972 141836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00972 764 Pfam Glycerophosphoryl diester phosphodiesterase family 366 656 IPR030395 GO:0006629|GO:0008081
Car01g00972 764 MobiDBLite consensus disorder prediction 702 740 - -
Car01g00972 764 ProSiteProfiles GP-PDE domain profile. 359 661 IPR030395 GO:0006629|GO:0008081
Car01g00972 764 ProSiteProfiles GP-PDE domain profile. 42 343 IPR030395 GO:0006629|GO:0008081
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g00972 Car09g00891 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00972 Car-Chr1:9265160 Car07g00443 Car-Chr7:2250592 6.89E-175 dispersed
Car01g00972 Car-Chr1:9265160 Car09g00891 Car-Chr9:5495693 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00972 - - bhj:120086180 1167.91