Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00973 ATGGGAGTGCTCGACACTGTCAAGAACATCGGCAGCGACCACGCCCCGGTCGTCCCCTTGACGTTGTTCGTTGCTGTTCTTTGTTTATGCTTGGTTATTGGCCATTTGCTCGAAGAAAATCGTTGGGTTAATGAATCCATCACTGCCATTATCATTGGAGGTGTTACTGGCACAATCATATTGGTCTGTAGCAAGGGAAAAGATTCTCATATCCTAACTTTTAATGAGGAAGTGTTCTTCATATATCTCCTTCCCCCAATAATTTTCAATGCTGGATTTCAAGTTAAAAAGAAGCAGTTCTTCCACAACTTCTTGACCATTATGCTGTTCGGGGTGATTGGTGTTTTTATATCTGCACTCATTATAACGTCTGGTAGCCAGTGGTTGTTTCCAAGGATGGGCTTCCATGGTCTGTCCGCACGGGACTATATTGCTATAGGTGCTATTTTTTCATCCACGGACACAGTATGCACTCTGCAGGTACTACACCAAGAGGAAACGCCTTTACTCTACAGTCTAGTCTTTGGGGAAGGAGTGGTGAATGATGCAACATCAGTTGTTCTCTTCAATGCAGTGCAGAAGATTGACATCACTAGGCTTAACAGCAAGACAGCCCTTCATGTGTTCGGAGATTTTTGTTACTTATTTTCAACTAGCACCGTCCTTGGAGTGACCGCTGGGCTTCTAACAGCATATATCCTGAAAACCTTATACTTCGGGAGGCATTCAAGTGTGCGTGAGCTTGCGATAATGGTTTTAATGGCTTACCTTTCATACATGCTAGCAGAGTTACTGGAGTTGAGTGGAATACTCACAGTTTTCTTTTGTGGGGTTATCATGCATGTATTTTCAATGATGTCGTTCGTTGCTGAAACTGCAATATTTCTTTACGTGGGCATGGATGCTCTTGACATAGAGAAGTGGAAGATAACTAAATTAAGCTTGTGGAAGTTGGTTTGTACATATAGCATAACAGTCTTCTTGATATTGCTTGGTCGTGCGGCCTTTGTATTTCCCCTATCTGCCATATCGAATTACTTCAATAAGCGTGAAGATAGATCATCATCGTCCTCTATAATCACATTTAAACAACAGATCATAATATGGTGGGCTGGACTGATGAGAGGAGCTGTATCTATTGCTCTGGCTTTCAAACAGGCTAGTTTTTCTTTCTGCTTTGAACTGTTAATTGATGCAATTCTGGAGTATATCATTTCTGATTTATCCGGGACATTCACCTATTCTGGGGTCACACGGGATCCAACCCACGCAACAATGATTACCATCACCACGGTTGTGGTGCTCTTCACTACGGTGGTATTTGGGTTTCTAACAAAGCCGCTCATAAGATGTCTGCTTCCACTCAACCAAGCAACTAACAGTGCAAGCAACTCCGGTCCGAAGTTCACCGAAGAGGACATAACTCTCCCTTTGCTTTCCATGGAAGAGTCTGCTGCAACCAATGTCCTCCGTGCAAAGGATAGTTTGTCAATGTTAATGGAGAGACCCGTGTACACCATACATTTCTTTTGGAGGAAATTCGATGATTACTACATGAGACCTATATTTGGAGGGCCTCGCCGCAGCAACCAACCTAGTGGTTCTGGTTGTTAG 1614 43.18 MGVLDTVKNIGSDHAPVVPLTLFVAVLCLCLVIGHLLEENRWVNESITAIIIGGVTGTIILVCSKGKDSHILTFNEEVFFIYLLPPIIFNAGFQVKKKQFFHNFLTIMLFGVIGVFISALIITSGSQWLFPRMGFHGLSARDYIAIGAIFSSTDTVCTLQVLHQEETPLLYSLVFGEGVVNDATSVVLFNAVQKIDITRLNSKTALHVFGDFCYLFSTSTVLGVTAGLLTAYILKTLYFGRHSSVRELAIMVLMAYLSYMLAELLELSGILTVFFCGVIMHVFSMMSFVAETAIFLYVGMDALDIEKWKITKLSLWKLVCTYSITVFLILLGRAAFVFPLSAISNYFNKREDRSSSSSIITFKQQIIIWWAGLMRGAVSIALAFKQASFSFCFELLIDAILEYIISDLSGTFTYSGVTRDPTHATMITITTVVVLFTTVVFGFLTKPLIRCLLPLNQATNSASNSGPKFTEEDITLPLLSMEESAATNVLRAKDSLSMLMERPVYTIHFFWRKFDDYYMRPIFGGPRRSNQPSGSGC 537
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9275838 9282983 + Carg22389-RA Car01g00973 141837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00973 537 Pfam Sodium/hydrogen exchanger family 23 450 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00973 Car-Chr1:9275838 Car11g01051 Car-Chr11:8054318 0 dispersed
Car01g00973 Car-Chr1:9275838 Car18g00580 Car-Chr18:6521603 1.59E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g00973 - - csv:101217775 868.226