Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01013 ATGGTGAAAATTAAGCTTGTTTCCTTGTCAATGGTGCTGTCTATCGCTTTGTTCTTGTGTATAGGATCTTATGCCTCCTTTACTCCCGTTGATAACTATTTGATAGCGTGTGGTTCTTCACAAAACATCACTTTCCAAGGTAGAACTTTCGTTCCTGATACTCAGCATTCATTGCTCTCCCTTGATGGTGGAAGCTCTGTTGTTGTTAGTTCAAAAGCTACTACTGTTCCATCTCCAATTTATCAATCTGCTCGGGTTTTCACCAGCGTTGCATCGTATACATTTGAAATCAAGGAAGAGGGTCGGCATTGGGTTCGGTTATATTTTTATCCTATACCGAAGTCGGAGCGGAATTTGGCGTCTTCGTCGATAACTGTTGTTACCGATGAGTTTGTGTTGTTGAACAAGTTTTCTTTCAAGAACTATAATGGTTCTTTTATGTTCAAGGAGTATGCTATCAATATCACTTCGGATTCCTTGACACTTACTTTTATCCCGTCTAATGGTTCGGTTTCGTTTGTTAATGCGATTGAAGTTGTCTCGGTGCCTGATGAGCTGCTCCCTGACCAAGCATTGGCTTTGAATCCATCTTCTCCTTTCAGTGGCATCTCGAAACTTGCTCTTGAAACTGTTTATCGACTGAACGTTGGGGGTCCTTTACTCACTTCGCAAAATGATACACTTGGAAGAACTTGGGAGAATGATATGAATTACCTCCATGTCAACAGTTCTGCTGTGAATATCTCTGCTAACCCGGGGAGCATAAAATATCATCCTGGTGTTACACCGGAGACTGCACCGAATTGGGTTTATGCTACTGCCGACGCCATGGGTGACCCGAATGTACCGAACGTGAACTTCAACTTGACTTGGGTTTTTTCTGTTGAGCCAAATTTTCAGTACTTCGTCCGAGTGCATTTTTGTGATATAATGAGCAAGGCTCTCAATAATCTGGTATTCAATCTTTACATCAATTCTGATAATGCTCTGGGAAGCTTTGATCTGTCGACGATAACCGGTGACTTGGGTGTGCCTTATTACAAAGACTTCATTGCCAACTCAGCAGGTTCAGCTACTTTGACCGTTAGTGTCGGTCCAGATCAAATGGCAGACCTCACGAATGCAACCATGAATGGCTTGGAGATTATGAAGTTAAGCAATCAAGATGGGAGCTTGGATGGAACTTCGTCGGTCGAAAGTCTTTTCCCAAATGCACCCTCGAAGAAGAACAATATAGCAATCATTGTTGGTCCTGTCTTGGGAGCTGTAGTCGGCCTTGCTTTGCTTGTCTTGTGTTATTGCTGCTTCGTAGCCCGCAGATCAAAGACGACTCAACCAGCACACCCATGGCTGCCTTTGCCTTTGTATGGAAACTCTCAAACCATGACAAAAGGATCAACAACTTCTCAAAAGAGTGGAACTGCAAGCTTCATTTCTTTGGCTTCCTCCAGCCTTGGAAGATTGTTCACATTTCAGGAAATTCTTGATGCTACCAACAAGTTTGATGAAAACCTGCTCCTTGGAGTTGGTGGTTTTGGTCGGGTTTACAAGGGAACACTCGAAGATGGTCTGAAAGTTGCGGTCAAAAGAGGTAACCCCAGATCGGAACAAGGTCTTGCCGAGTTTCGAACTGAAATAGAAATGTTATCAAAGCTCCGACATCGTCACTTGGTGTCTCTTATTGGCTATTGTGACGAAAGATCAGAAATGATTCTTGTCTATGAATATATGGCGAATGGACCTTTACGGAGTCATTTGTATGGAACGAATCTACCGCCATTGTCATGGAAGCAACGACTTGATATTTGCATTGGTGCTGCGAGAGGGCTTCATTATCTTCACACTGGTGCAGCTCAAAGCATAATACACCGGGATGTTAAAACGACAAACATTCTCTTGGACGAGAATTTCGTTGCGAAAGTTGCAGACTTTGGTCTCTCAAAAACTGGGCCATCTCTGGATCAGACTCATGTTAGTACTGCTGTCAAGGGTAGTTTTGGTTACCTCGATCCTGAATACTTCAGGCGACAACAGCTCACCGAGAAGTCAGACGTATATTCATTTGGGGTCGTGCTAATGGAAGTTCTCTGCACGAGACCAGCGCTTAACCCTGTTCTACCCCGAGAACAAGTCAATATAGCCGAATGGGCAATGACCTGGCAGAAGAAGGGCATGCTAGATCATATCATGGACCCCAATCTGGTTGGTAAAGTTAACCCAGCATCGCTTAAGAAGTTCGGTGAAACAGCTGAGAAGTGCCTGGCTGAGTATGGGGTTGACAGACCTTCTATGGGAGACGTCCTATGGAATCTGGAATACGCTCTTCAGCTCGAGGAAACCTCATCCGCTCTAATGGAACCTGAAGACAACAGCACAAACCACATCCCTACTATCCAATTAACCCCTCTCGAGCCATTTGATAACAGTGTAAGCATGATCGATGTAGGGAACTCCGGTACTGACGATGATGCTGAAGATGCTGCAACAAGTGCAGTATTTTCCCAGCTCGTAAATCCTCGCGGAAGATGA 2529 44.29 MVKIKLVSLSMVLSIALFLCIGSYASFTPVDNYLIACGSSQNITFQGRTFVPDTQHSLLSLDGGSSVVVSSKATTVPSPIYQSARVFTSVASYTFEIKEEGRHWVRLYFYPIPKSERNLASSSITVVTDEFVLLNKFSFKNYNGSFMFKEYAINITSDSLTLTFIPSNGSVSFVNAIEVVSVPDELLPDQALALNPSSPFSGISKLALETVYRLNVGGPLLTSQNDTLGRTWENDMNYLHVNSSAVNISANPGSIKYHPGVTPETAPNWVYATADAMGDPNVPNVNFNLTWVFSVEPNFQYFVRVHFCDIMSKALNNLVFNLYINSDNALGSFDLSTITGDLGVPYYKDFIANSAGSATLTVSVGPDQMADLTNATMNGLEIMKLSNQDGSLDGTSSVESLFPNAPSKKNNIAIIVGPVLGAVVGLALLVLCYCCFVARRSKTTQPAHPWLPLPLYGNSQTMTKGSTTSQKSGTASFISLASSSLGRLFTFQEILDATNKFDENLLLGVGGFGRVYKGTLEDGLKVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTNLPPLSWKQRLDICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPSLDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDHIMDPNLVGKVNPASLKKFGETAEKCLAEYGVDRPSMGDVLWNLEYALQLEETSSALMEPEDNSTNHIPTIQLTPLEPFDNSVSMIDVGNSGTDDDAEDAATSAVFSQLVNPRGR 842
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9662947 9665475 - Carg14677-RA Car01g01013 141877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01013 842 Pfam Malectin-like domain 35 384 IPR024788 -
Car01g01013 842 ProSiteProfiles Protein kinase domain profile. 501 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01013 842 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Car01g01013 842 Pfam Protein tyrosine and serine/threonine kinase 506 699 IPR001245 GO:0004672|GO:0006468
Car01g01013 842 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01013 Car09g00807 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01013 Car-Chr1:9662947 Car02g00610 Car-Chr2:4609613 0 dispersed
Car04g01310 Car-Chr4:7613607 Car01g01013 Car-Chr1:9662947 0 dispersed
Car04g01880 Car-Chr4:10903728 Car01g01013 Car-Chr1:9662947 0 dispersed
Car06g00297 Car-Chr6:1656000 Car01g01013 Car-Chr1:9662947 2.26E-78 dispersed
Car12g01100 Car-Chr12:10723567 Car01g01013 Car-Chr1:9662947 0 dispersed
Car02g00343 Car-Chr2:2484088 Car01g01013 Car-Chr1:9662947 1.62E-142 transposed
Car03g00604 Car-Chr3:5614714 Car01g01013 Car-Chr1:9662947 7.65E-75 transposed
Car01g01013 Car-Chr1:9662947 Car09g00807 Car-Chr9:4886675 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88602 PF12819 Malectin_like 4.60E-39 CL0202 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01013 - - csv:101215627 1525.38