Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01040 ATGTCTGACGTAGCGAGTATAGCAGAGGCGGTCGCAGCAAGGTTTAGTTCTTTGGAGCTTATTGGAAGAGGATCTTTTGGTGATGTATACAAGGGGTTTGACAAGGAGCTTAACAAAGAAGTCGCTATCAAAGTTATTGATTTGGAAGAATCTGAGGATGAAATTGAGGATATTCAGAAGGAAATTTCTGTTTTGTCACAATGTCGATCGCCCTACATTACTGAGTATTATGGTTCTTATCTCCACCAGACGAAGTTATGGATAATAATGGAATATATGGCTGGGGGCTCTGTTGCAGATCTGCTGCAAACCGGGCCACCCCTTGATGAAATGTCAATGGCATGCATTCTACGGGATTTGCTGCATGCAATTGATTATTTGCACAGTGAAGGAAAAATCCACAGAGACATTAAAGCGGCAAACATTTTACTGAGCGAAAATGGTGATGTTAAGGTTGCAGATTTTGGTGTTTCTGCTCAATTAACAAGGACAATATCAAGGAGAAAGACATTTGTAGGAACTCCATTCTGGATGGCGCCAGAGGTTATTCAGAATTCTGAAGGATACAATGAGAAGGCAGACATCTGGTCTCTAGGAATCACTGCTATTGAAATGGCAAAAGGGGAGCCTCCACTTGCTGATCTTCATCCCATGCGAGTTCTTTTTATCATACCTCGTGAAAATCCACCTCAGTTGGATGAACATTTTTCTCGCCCTATGAAAGAATTAGTGTCACTGTGTCTGAAGAAAACACCTGCTGAGAGGCCCAGTGCCAAAGAGCTTCTGAAGCATCGGTTCATTAAGAATGCCAGGAAGAGTCCTAGGCTTCTGGAGAGAATAAGAGAACGTCCGAAGTACCAAATAAAGGAAGATGTAGAGACACCAACTAATAGTCCTAGAGGTGTGGGTGAAATGGACACGGTGAAAGTATCAAGAAATTTAAGAGAAGAAACTGTTCGTGCCAGCAACCAGAGTAAAACTCCTAAGAATGCGGGATGGGACTTTAGCATTGGGGGACCACATAGTACAGGTACTGTTCGAAGTGTAAAACCACCTCAAGTTGGGGAAAGAAAACCAGAAATTCCTTATGGTCAGGCTGCGCCTAGTAGAGTTGCAGAGAGCGGTAACTGGCTAGCTGCATCTGGAAATGCACCACGTGACATAGCAGAAAGCACTAGAGATTCATACAATACGGGGAATGCTAGTGAAGATGAAGAGTTATCTGTAAGTGGTTCAGGAACTATTGTGATTCGGTCTCCCAGGGGATCTAATGCATCTACTCAATTTCATAATGAAAACAATCCGTCTGGAAGTGCACAAGCATGTTTTGAGGACACATCCCTTAGTGGTACTATTGTTATGCGTGGTGAACGTGATGATTCTGATTCTCCTCGGACTCCTAAATCCAGATTGGGAATTCAAGAAAAAACTTCAAGTTTGTCTCCTGAAGATAGTGCATTTAACCTTGCGGAGGCAAAGGCTGCAATTCAAGCAGCAGGATTGAAGAGAGCTAATGCAAGGGAAAGATCAGCTCGCCCTATACACAGCGACAGGAAGGAAAATAGAAGAACAGAGCAAACAGTGAGTAGCTCTGACTCTTCGAGGCATTCTCATGAATTCTTTGATGCACCAAGAGCATTGCCAAAACCTTCTCTATCAAGTGATAATGAAGAATTTGCAAAAATAGCCTCGGGTTCTGCACCTTTATCGATGTTGTTTATGCCATCCTTGAAAGAGGTAGTTGCAGATGATTCGGAAGGATCACCTTCTCATACCGTAATTAATGCACTTATAAACATGGAACGCGTAAAACCTGGATCATGTGAAGTTCTTGTTACCAAGTTGCTCCAGAAATTGGCCAGTTCTGAGGAATCTTCACTGAAAAATTTACAAGACTTGGCCACTCGCTTATTCAACAAGGCAAAGACAGTTCCTGAAGATACACAAGATGTCGCCGATTCTGATAGCAGCAAAAAGCAATCGAACAAGGAACTTCATTCAAATTCTAATTTGAGCTCGCTTGCTAGATTTTTACTCTCCAGATGGCAAGGTCAGGTATCAAGGGATCTGAGTCCAGCTTGA 2082 42.7 MSDVASIAEAVAARFSSLELIGRGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLSQCRSPYITEYYGSYLHQTKLWIIMEYMAGGSVADLLQTGPPLDEMSMACILRDLLHAIDYLHSEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKELVSLCLKKTPAERPSAKELLKHRFIKNARKSPRLLERIRERPKYQIKEDVETPTNSPRGVGEMDTVKVSRNLREETVRASNQSKTPKNAGWDFSIGGPHSTGTVRSVKPPQVGERKPEIPYGQAAPSRVAESGNWLAASGNAPRDIAESTRDSYNTGNASEDEELSVSGSGTIVIRSPRGSNASTQFHNENNPSGSAQACFEDTSLSGTIVMRGERDDSDSPRTPKSRLGIQEKTSSLSPEDSAFNLAEAKAAIQAAGLKRANARERSARPIHSDRKENRRTEQTVSSSDSSRHSHEFFDAPRALPKPSLSSDNEEFAKIASGSAPLSMLFMPSLKEVVADDSEGSPSHTVINALINMERVKPGSCEVLVTKLLQKLASSEESSLKNLQDLATRLFNKAKTVPEDTQDVADSDSSKKQSNKELHSNSNLSSLARFLLSRWQGQVSRDLSPA 693
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9848189 9864168 + Carg14704-RA Car01g01040 141904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01040 693 MobiDBLite consensus disorder prediction 388 442 - -
Car01g01040 693 MobiDBLite consensus disorder prediction 643 668 - -
Car01g01040 693 Coils Coil 489 509 - -
Car01g01040 693 MobiDBLite consensus disorder prediction 317 331 - -
Car01g01040 693 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Car01g01040 693 MobiDBLite consensus disorder prediction 316 369 - -
Car01g01040 693 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01040 693 MobiDBLite consensus disorder prediction 505 526 - -
Car01g01040 693 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car01g01040 693 MobiDBLite consensus disorder prediction 381 442 - -
Car01g01040 693 MobiDBLite consensus disorder prediction 500 553 - -
Car01g01040 693 MobiDBLite consensus disorder prediction 455 483 - -
Car01g01040 693 Coils Coil 41 68 - -
Car01g01040 693 MobiDBLite consensus disorder prediction 646 662 - -
Car01g01040 693 MobiDBLite consensus disorder prediction 467 483 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01040 Car09g00765 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01040 Car-Chr1:9848189 Car06g00521 Car-Chr6:2927950 3.47E-70 dispersed
Car18g01016 Car-Chr18:10579415 Car01g01040 Car-Chr1:9848189 3.39E-80 transposed
Car01g01040 Car-Chr1:9848189 Car09g00765 Car-Chr9:4506737 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
88603 PF00069 Pkinase 5.80E-69 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01040 K08838 - csv:101214412 1185.63