Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01137 ATGATCCCTTTCAAGCAATCATTCGTTTGTGTTAGCCCCTCAATTTCTCAGAAAGTAGAACTTATGGCGTCAAGTGTTGATGAAGATGGTAGGGAGCCAGCCATGGAGTCTGGAGAATCTGAGGAAGGAATTGTTGTCCGGGAAGTCTGTGCAAATGGGGTCTCCATAAAAACAACAGAAGTAGAAGCAAAACTCGATGAAGGAAATATTCAAGAGGCAGAATCTTCATTACGGGATGGGTTATCCCTCAATTCTGAGGAAGCCAGAGCCCTTCTTGGAAAGTTGGAATATCAGAGAGGTAATCTAGAAGGTGCACTACGTGTGTTCGATGGTATTGATCTCCAAGCAGCTATTCAACGATTACAGCCTTGTATTGCTGAGAAGACACCTCCAAAAAAAGGACGTTCGCGCTCTGATTCTCAGCCTGCAGTTTCACAGCATGCTGCAAGCCTGGTGCTTGAAGCCATATATTTAAAAGTGAAGTCTCTTCAGAAGTTAGGGAGAGTAACTGAGGCTGCTGATGAGTGTACTAGTGTACTTGACGCCATAGAGAAGATATTCCAACAAGGAATTCCTGACGGGCAAGTGGATGATAGATTGCAAGAGACTGTCAATCAGGCTGTTGAACTCCTCCCTGAGCTGTGGAAGCAGGCTGGCTGTTTCCAGGAAGCAATATCTGCCTATAGGCGTGCTCTCTTAAACCAATGGAACCTCAGTAATGACAGCTATGCTAGGATCCAGAAAGGATTTGCTGTGTTTTTGCTTTACAGTGGAGTAGACGCTGGTCCTCCTAGTCTAGCTGTTCAACTTGAAGGTTCATATGTACCGAAAAATAATTTGGAAGAAGCAATTCTACTTTTGATGCTTCTTGTGAAGGAATGTTTCCTTGGTAATACAAAATGGGATCCATCCGTGATGGAGCACCTAATATTTGCTCTATCCTCATGCAGACAGACTTCTGTTTTAGCAAAACAATTTGAAGAGGTCATGCCTGGGGTATATCGCCGTGTAGATCGTTGGAAGTATTTAGCTCTTTGTTATTGTGCAGCAGGACAGAACAAAGTTGCCTTGAATCTTCTGAGAAAGACTCTACACAAACACGAGCAACCAGGCGATGTAGCAGCCTTATTACTGGCTGCCAAGATCTGTAGTGAGGATCCTTATCTAGCTGCTGAAGGTGTTGAATACGCCCAGCGGGCAATGAATAATTGTACAGGAGATGAAGAGCATTTAAAGGGTGTGGGTCTTCGCATGTTAGGTCTTTGCTTGGGAAAACAAGCCAAAATTTCTTCCTCTGACTTCGAGAGGTCCCGTCTTCAGTCAGAGGCATTGAAATCTCTTGAGGCTGCAAATGGTCTGGAGAGAAATAACTTAGATTTGATGCTTGAGTTAGGAGTACAGTATTCGGAATATCGGAATTTGAATGCTGCATTGCAATATGCAAAGAAGTTCATTGATGAAACCGGTGGCTCTGTCTTAAAAGGCTGGCAGTTGCTCGCTCTTGTTTTGTCTGCCCAAAAGAGATTTCCAGAGGCGGAAGTGGTCACTGACGCTGCAATGGATGAGACCACAAAATGGGAACGAGGACCACTTCTTAGACTCAAGGCAAAGCTGAAAATCTCTCAATCATTACATATGGATGCTATTGAAACATACCGTTATCTCCTTGCATTAGTTCAAGCACAAAAGAAATCCTTTGGACCGCTCAGAATCGTCCCTCAGGTTGAAGATGACAAATTGAATGAATTTGAAGTTTGGAATGGTCTAATGCACCAAGGATGTGAGAAAATACAGGAAGCCCTAGCTGCATACATTAACGCTCTTCTACTTGAACCAACTTACGTTCCTTGCAAGGTTTTGATTGGTGCTATTTGGTCGAAAGCAGGCCCGGATGCGTTGCCTATAGCAAGAGGCTTACTTTCCGACGCATTGAGATTAGATCCGACCAACGGTAAGGCTTGGTTGTACTTGGGGGTGATCCATAGGGACGAAGGACGAATGGCTGATGCTGTAGACTGCTTCCAGGCAGCCGCCATGCTTGAAGAATCAGATCCCGTCGAAAGCTTCAGC 2070 44.54 MIPFKQSFVCVSPSISQKVELMASSVDEDGREPAMESGESEEGIVVREVCANGVSIKTTEVEAKLDEGNIQEAESSLRDGLSLNSEEARALLGKLEYQRGNLEGALRVFDGIDLQAAIQRLQPCIAEKTPPKKGRSRSDSQPAVSQHAASLVLEAIYLKVKSLQKLGRVTEAADECTSVLDAIEKIFQQGIPDGQVDDRLQETVNQAVELLPELWKQAGCFQEAISAYRRALLNQWNLSNDSYARIQKGFAVFLLYSGVDAGPPSLAVQLEGSYVPKNNLEEAILLLMLLVKECFLGNTKWDPSVMEHLIFALSSCRQTSVLAKQFEEVMPGVYRRVDRWKYLALCYCAAGQNKVALNLLRKTLHKHEQPGDVAALLLAAKICSEDPYLAAEGVEYAQRAMNNCTGDEEHLKGVGLRMLGLCLGKQAKISSSDFERSRLQSEALKSLEAANGLERNNLDLMLELGVQYSEYRNLNAALQYAKKFIDETGGSVLKGWQLLALVLSAQKRFPEAEVVTDAAMDETTKWERGPLLRLKAKLKISQSLHMDAIETYRYLLALVQAQKKSFGPLRIVPQVEDDKLNEFEVWNGLMHQGCEKIQEALAAYINALLLEPTYVPCKVLIGAIWSKAGPDALPIARGLLSDALRLDPTNGKAWLYLGVIHRDEGRMADAVDCFQAAAMLEESDPVESFS 690
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10528698 10534573 - Carg24712-RA Car01g01137 142001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01137 690 ProSiteProfiles TPR repeat profile. 651 684 IPR019734 GO:0005515
Car01g01137 690 Pfam Tetratricopeptide repeat 63 110 - -
Car01g01137 690 Pfam Tetratricopeptide repeat 653 684 IPR019734 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01137 Car-Chr1:10528698 Car02g01484 Car-Chr2:9646193 0 dispersed
Car01g01137 Car-Chr1:10528698 Car09g00635 Car-Chr9:3688738 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car01g01137 K21843 - csv:101206641 1174.84